Jatropha Genome Database

JcCB0372241.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0372241.10 + phase: 0 /pseudo/partial
         (435 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29929.m004503 beta-hexosaminidase, putative                           402   e-112

>29929.m004503 beta-hexosaminidase, putative
          Length = 1584

 Score =  402 bits (203), Expect = e-112
 Identities = 364/417 (87%), Gaps = 3/417 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   cagacagtttatggggctttacatgggcttcagacatttagccaattgtgctatttcaac 63
           |||||| | ||||| ||||||||||||||||||||||| |||||| | ||| |||| |||
Sbjct: 400 cagacaatctatggagctttacatgggcttcagacattcagccaactatgccattttaac 459

                                                                       
Query: 64  ttcacaacgagcatggttgaagttcctatggtcccatggactatcattgatcagccaaga 123
           || | ||| ||  || |||||||||  |||||||||||||| ||||||||||||||||| 
Sbjct: 460 tttaaaaccagtgtgattgaagttcgaatggtcccatggacaatcattgatcagccaagg 519

                                                                       
Query: 124 ttcccctaccggggactcttgattgatacttcacggcactatctgcctttgccagttatt 183
           ||| | |||||||| |||||||||||||||||||| || |||| |||  ||||| | |||
Sbjct: 520 ttctcttaccgggggctcttgattgatacttcacgacattatcagccactgccaatgatt 579

                                                                       
Query: 184 gagaaagtgattgattctatggcctatgcaaaattgaatgttttacactggcacattgta 243
            |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 580 aagaaagtgattgattctatggcctatgcaaaactgaatgttttgcactggcacattgta 639

                                                                       
Query: 244 gatacacaatctttccctttggagataccttcatatccaaaactgtggaatggtgcctat 303
           |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 640 gatacacaatcttttcctctggagataccttcatatccaaaactgtggaatggtgcttat 699

                                                                       
Query: 304 tcaatttcagagcgatacacttttgctgatgctgctgaaattgtcaggcaagttgtttct 363
           ||| |||| |||||||||||||||||||||||||| |||||||| ||  |   ||     
Sbjct: 700 tcagtttccgagcgatacacttttgctgatgctgcagaaattgtgagtta---tgccgag 756

                                                                    
Query: 364 gctcaaggaattcacgtattggctgaaattgatgttcctggacatgcactctcatgg 420
              |||||||||||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 aggcaaggaattcatatattggctgaaattgatgttcctggacatgcactctcatgg 813