Jatropha Genome Database

JcCB0369011.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0369011.10 - phase: 0 /pseudo/partial
         (479 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m013976 spermidine synthase 1, putative                         291   2e-78

>30147.m013976 spermidine synthase 1, putative
          Length = 1032

 Score =  291 bits (147), Expect = 2e-78
 Identities = 270/311 (86%)
 Strand = Plus / Plus

                                                                       
Query: 169 tggtatgctgatgtttcttgcggatggccaggagaagcacatttgtacaaggtggaaaag 228
           ||||||||||||||| | ||||| ||||||||||| || || ||||| ||| ||||||||
Sbjct: 175 tggtatgctgatgttccctgcgggtggccaggagaggctcacttgtataagatggaaaag 234

                                                                       
Query: 229 gtcttgtttcatggcaaatcggaatatcaagatctttttgtatttcagtcatcagcacat 288
           |||||||||||||| ||||| || || ||||| |||| |||||||||||||||||| || 
Sbjct: 235 gtcttgtttcatgggaaatcagagtaccaagacctttatgtatttcagtcatcagcccac 294

                                                                       
Query: 289 ggcaagattgtaatattgaatggggctcttcaactgacagaaaaagatgagtttgtctat 348
           ||||||||||||||||||||||||||||||||||| || || || || || |||| ||| 
Sbjct: 295 ggcaagattgtaatattgaatggggctcttcaacttactgagaaggacgaatttgcctac 354

                                                                       
Query: 349 caagaaatgctcactcacctccctctttgctccattcctaaccctaaaaaggtattacta 408
           ||||||||||||||||||||||| |||||||||||||| || || || |||||||| |||
Sbjct: 355 caagaaatgctcactcacctcccactttgctccattccaaatccaaagaaggtattgcta 414

                                                                       
Query: 409 attggaggaggtgatggtggcattctaagagaaatttctcgacattcttctgttaatcag 468
           ||||| || || |||||||| ||||||| |||||| ||||||||||| || ||  | |||
Sbjct: 415 attgggggtggagatggtggaattctaaaagaaatatctcgacattcctcagtagagcag 474

                      
Query: 469 attgatatatg 479
           |||||||||||
Sbjct: 475 attgatatatg 485