Jatropha Genome Database
- JcCB0368641.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0368641.10 - phase: 1 /partial
(1268 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
28677.m000055 DELLA protein GAI, putative 402 e-111
30131.m007029 DELLA protein GAI1, putative 66 6e-10
29692.m000540 DELLA protein GAIP-B, putative 60 3e-08
>28677.m000055 DELLA protein GAI, putative
Length = 1704
Score = 402 bits (203), Expect = e-111
Identities = 861/1074 (80%), Gaps = 9/1074 (0%)
Strand = Plus / Plus
Query: 183 ttagcgtgtgcagaagctgttcaacaagataatttgaaactagcagaagcattattgaag 242
||||| |||||||||||| | || ||||| ||||| || |||||||||||| | | |||
Sbjct: 613 ttagcctgtgcagaagctatccagcaagacaatttcaagctagcagaagcactcctcaag 672
Query: 243 cacataggtttgctcgcggcgtctcaagctagttctatgagaaaagtcgctacttatttt 302
|||||||| ||||| || || ||||| |||||||| ||||||||||| |||||||| ||
Sbjct: 673 cacataggcttgctggccgcttctcaggctagttccatgagaaaagtggctacttacttc 732
Query: 303 gcagaagcattagctcgtcgaatttacaaaatctaccctcaagagagct-tggatccttc 361
|| ||||||||||||||||| ||||||||||| |||||||| || | || | || |||||
Sbjct: 733 gctgaagcattagctcgtcggatttacaaaatttaccctcagga-atctctcgacccttc 791
Query: 362 ctattctgatactttagagatgcatttctacgaaacctgtccttacctcaaattcgctca 421
||| || || |||||||||||||||||||| || || || ||||| ||||||||||| ||
Sbjct: 792 ctactccgacactttagagatgcatttctatgagacttgcccttatctcaaattcgcaca 851
Query: 422 tttcacagctaatcaagccattctcgaggcattttcaactgcaaatcgagtacatgtgat 481
|||||| || || ||||||||||| || || ||| |||||||| |||| ||||||||
Sbjct: 852 tttcactgcgaaccaagccattcttgaagcttttggcactgcaaacagagttcatgtgat 911
Query: 482 tgattttgggcttaaacaaggtatgcagtggccggcgcttatgcaagcacttgctttgag 541
||||||||| || || ||||| ||||| ||||| || || |||||||| || || || |
Sbjct: 912 tgattttggactaaagcaaggcatgcaatggcctgcactcatgcaagctctggccttacg 971
Query: 542 gccaggtggcccgccgtctttccgtttaaccgggattggaccaccgcagcctaataatac 601
|| || ||||| || | || |||||||| || ||||| || |||||| | ||||| ||
Sbjct: 972 ccctggcggcccacccgcgtttcgtttaactggaattggccccccgcagtccaataacac 1031
Query: 602 cgatactttgcagcaagtcggttggaagttagcgcaattggcggaagctattggtgttga 661
|||| |||| ||||||||||| |||||| | |||||||| || || | ||||| || ||
Sbjct: 1032 cgatgctttacagcaagtcgggtggaagcttgcgcaattagccgacacaattggcgtcga 1091
Query: 662 atttgaattccgtggtttcgttgcgaatagtttggcggatctgcagccggaaatgctcga 721
||| ||||| || || ||||| || |||||||| || ||||| || || |||||||||||
Sbjct: 1092 attcgaatttcgcggattcgtcgctaatagtttagctgatctccaacccgaaatgctcga 1151
Query: 722 cgtccgc---cctgatgtcgagacggtcgccgtcaattcggttttcgagcttcaccgcct 778
| ||||| ||||| ||||| || || |||||||| || || |||||||| ||||||||
Sbjct: 1152 cctccgccctcctgacgtcgaaacagttgccgtcaactccgtgttcgagctccaccgcct 1211
Query: 779 cctggcccgtccaggtgggattgataaagttctttcctctgttaaagcaatgaagcctaa 838
|| ||||| || || ||||| || || |||||||||||| | ||||||||||| || ||
Sbjct: 1212 tctagcccgacccggcgggatggaaaaggttctttcctctatcaaagcaatgaaacccaa 1271
Query: 839 aattgtaaccattgttgaacaagaagcaaaccacaacggtccggnnnnnnnagaccggtt 898
|| || || | ||||| |||||||| | |||||||||||||| |||||||||
Sbjct: 1272 gatcgtcactgtcgttgagcaagaagccagccacaacggtccggtttttctagaccggtt 1331
Query: 899 tactgaagcgttgcattactattcgagtttgtttgactcgttggaaggatctgggtcag- 957
|| ||||| |||||||||||||||||||||| |||||||| ||||| || ||||| |
Sbjct: 1332 cacagaagcactgcattactattcgagtttgttcgactcgttagaagggtc-gggtctga 1390
Query: 958 ttgtaccgagtcaagacctggttatgtccgagttatacttaggaaggcagatttgtaatg 1017
|| ||||||||||| || |||||||||||||| || ||||| ||||| || |||||||
Sbjct: 1391 acgttccgagtcaagatctagttatgtccgagttgtatttaggtaggcaaatatgtaatg 1450
Query: 1018 ttgtagcttgggaaggagcagaccgagttgagcgacatgagacgcttg-ctcagtggaga 1076
|||| || || || || || |||| |||||||| ||||||| | ||| |||| ||| |
Sbjct: 1451 ttgtggcctgcgagggggctcaccgggttgagcggcatgaga-gtttgcctcattggcgg 1509
Query: 1077 actcggattgatgcagctgggttcgaaccggttcaccttggttcaaacgcgtataaacaa 1136
||||| |||| | || ||||| || || || || ||||| || |||| |||||||
Sbjct: 1510 actcgatttgaatcggccgggtttgacagagtgcatctcggttcgaatgcgtttaaacaa 1569
Query: 1137 gctggcatgttgttagatatattcgctggtggtgatgggtatagagtagaggaaaaagat 1196
||| | ||||| |||| |||| || ||||| ||||||||||||||||||||||| |
Sbjct: 1570 gctagtatgttattagccttatttgccggtggcgatgggtatagagtagaggaaaataac 1629
Query: 1197 ggatgcttgatgcttggttggcatacgagaccgctaattgtcacctcggcttgg 1250
|| || || ||||||||||||||||| ||||| || |||| ||||||||||||
Sbjct: 1630 gggtgtttaatgcttggttggcatactagaccactgattgctacctcggcttgg 1683
>30131.m007029 DELLA protein GAI1, putative
Length = 2061
Score = 65.9 bits (33), Expect = 6e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 411 aaattcgctcatttcacagctaatcaagccattctcgaggc 451
||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 1240 aaattcgctcatttcactgctaatcaagccattttcgaggc 1280
>29692.m000540 DELLA protein GAIP-B, putative
Length = 1830
Score = 60.0 bits (30), Expect = 3e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 379 agatgcatttctacgaaacctgtccttacctcaaattcgctcatttcacagctaatcaag 438
||||||| || || || ||||| ||||| || ||||||||||||||||| |||||||| |
Sbjct: 929 agatgcacttttatgagacctgcccttatcttaaattcgctcatttcactgctaatcagg 988
Query: 439 ccattctcga 448
| ||||||||
Sbjct: 989 caattctcga 998
Score = 56.0 bits (28), Expect = 5e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 285 aaagtcgctacttattttgcagaagcattagctcgtcgaattta 328
|||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 835 aaagtcgctacttactttgcagaagcgttagctcgaagaattta 878