Jatropha Genome Database

JcCB0367281.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0367281.10 - phase: 0 /pseudo/partial
         (360 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28200.m000195 transaldolase total2, putative                          262   1e-69

>28200.m000195 transaldolase total2, putative
          Length = 1179

 Score =  262 bits (132), Expect = 1e-69
 Identities = 260/302 (86%), Gaps = 3/302 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcactctccttgcaatctccgcccttttctgctctttactccaaatcatttcttcag 60
           |||||||||||||||||||||||||| | ||| ||| | | ||||||||| | |||||||
Sbjct: 1   atgtcactctccttgcaatctccgccttcttcagctatctcctccaaatcttctcttcag 60

                                                                       
Query: 61  aatggagggaacttgaggctgctaggtggatcgggagcttcaaatgcaatcttcttcaag 120
             || | |    ||||||||  || |||||||  ||||||||| |||  | || ||||||
Sbjct: 61  ggtgcaaga---ttgaggcttttaagtggatcaagagcttcaagtgctgtttttttcaag 117

                                                                       
Query: 121 ttacaacggtcttttccacaaattcgtgcttcttctggcttctcttcttctctcgatact 180
           || |||  ||||||||| ||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 118 ttccaatcgtcttttcctcaaattcgtgcttcttctggcttctcttcttctttagatact 177

                                                                       
Query: 181 ggtgcgagcactgaattggatgctgtgtctagctttagtgaaatcgttcctgacaccgtc 240
           ||||| || |||||||||||||||||||||||||| ||||| || |||||||| || |||
Sbjct: 178 ggtgcaagtactgaattggatgctgtgtctagcttcagtgagatagttcctgatactgtc 237

                                                                       
Query: 241 atattcgatgatttcgagaagtttcctccaactgctgctactgttagctcttcgcttctt 300
           || || |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 238 atctttgatgatttcgagaagtttcctccaactgctgctactgttagctcttcgctcctt 297

             
Query: 301 tt 302
           ||
Sbjct: 298 tt 299



 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                  
Query: 306 aatgcagtggatatggctttggccgattcaggttgtgctgctctgaaaaatcctg 360
           ||||| ||||||||||| ||||| |||||||||||||| |||||| | |||||||
Sbjct: 334 aatgctgtggatatggccttggcagattcaggttgtgcagctctggataatcctg 388