Jatropha Genome Database
- JcCB0365731.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0365731.10 + phase: 0 /partial
(161 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30064.m000481 gaba(A) receptor-associated protein, putative 198 7e-51
30064.m000482 gaba(A) receptor-associated protein, putative 170 2e-42
29842.m003584 gaba(A) receptor-associated protein, putative 117 2e-26
30174.m008829 gaba(A) receptor-associated protein, putative 54 2e-07
29636.m000773 gaba(A) receptor-associated protein, putative 52 1e-06
>30064.m000481 gaba(A) receptor-associated protein, putative
Length = 363
Score = 198 bits (100), Expect = 7e-51
Identities = 136/148 (91%)
Strand = Plus / Plus
Query: 10 atggccaacagctccttcaagtttgaacatcctttggaaagaaggcaggcagaatctgcc 69
||||| || |||||||||||||| ||||||||| ||||||| |||||||||||||| ||
Sbjct: 1 atggctaagagctccttcaagttggaacatcctctggaaaggaggcaggcagaatcagct 60
Query: 70 cgtattagggagaagtatcctgatagaataccagttattgtggagagggctgaaagaagt 129
|||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 61 cgtattagggagaaatatccagatagaataccggttattgtggagagggctgaaagaagc 120
Query: 130 gacatacctgacatcgacaaaaagaagt 157
|||||||||||||| |||||||||||||
Sbjct: 121 gacatacctgacattgacaaaaagaagt 148
>30064.m000482 gaba(A) receptor-associated protein, putative
Length = 378
Score = 170 bits (86), Expect = 2e-42
Identities = 131/146 (89%)
Strand = Plus / Plus
Query: 10 atggccaacagctccttcaagtttgaacatcctttggaaagaaggcaggcagaatctgcc 69
|||||||| |||||||||||| | ||||| ||| | ||||| |||||||||||||| ||
Sbjct: 1 atggccaaaagctccttcaagctggaacaccctctagaaaggaggcaggcagaatcagct 60
Query: 70 cgtattagggagaagtatcctgatagaataccagttattgtggagagggctgaaagaagt 129
||||| |||||||| ||||||||| |||| |||||||||||||||||||| |||||||||
Sbjct: 61 cgtataagggagaaatatcctgatcgaattccagttattgtggagagggccgaaagaagt 120
Query: 130 gacatacctgacatcgacaaaaagaa 155
|||||||||||||| |||||||||||
Sbjct: 121 gacatacctgacattgacaaaaagaa 146
>29842.m003584 gaba(A) receptor-associated protein, putative
Length = 363
Score = 117 bits (59), Expect = 2e-26
Identities = 113/131 (86%)
Strand = Plus / Plus
Query: 10 atggccaacagctccttcaagtttgaacatcctttggaaagaaggcaggcagaatctgcc 69
||||| || ||||||||||| |||||||||||||||| || |||||||||||| ||||
Sbjct: 1 atggctaaaagctccttcaaacttgaacatcctttggagaggaggcaggcagaagctgct 60
Query: 70 cgtattagggagaagtatcctgatagaataccagttattgtggagagggctgaaagaagt 129
|| || || ||||||||||||||||||||||| || ||||| || | |||||||||||||
Sbjct: 61 cgcatcagagagaagtatcctgatagaatacctgtcattgtagaaaaggctgaaagaagt 120
Query: 130 gacatacctga 140
|| || |||||
Sbjct: 121 gatattcctga 131
>30174.m008829 gaba(A) receptor-associated protein, putative
Length = 354
Score = 54.0 bits (27), Expect = 2e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 85 tatcctgatagaataccagttattgtggagagggctgaaagaagtgacatacctgacat 143
||||| |||||| | || || |||||||||| ||||||||||||||| || ||||||||
Sbjct: 76 tatccagatagagttccggtaattgtggagaaggctgaaagaagtgatattcctgacat 134
>29636.m000773 gaba(A) receptor-associated protein, putative
Length = 369
Score = 52.0 bits (26), Expect = 1e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 76 agggagaagtatcctgatagaataccagttattgtggagagggctgaaagaagtgacata 135
|||||||| || || ||||| || ||||| |||||||||| ||| ||||||||||| |||
Sbjct: 67 agggagaaatacccagataggattccagtaattgtggagaaggcagaaagaagtgatata 126
Query: 136 cc 137
||
Sbjct: 127 cc 128