Jatropha Genome Database

JcCB0364041.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0364041.10 + phase: 0 /partial
         (465 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m007258 conserved hypothetical protein                          422   e-118

>30131.m007258 conserved hypothetical protein
          Length = 1323

 Score =  422 bits (213), Expect = e-118
 Identities = 404/468 (86%), Gaps = 6/468 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtctgggcttcaggtttctctgcagcttttctaaaaaagaacagtgttgctacaagagtt 60
            ||||||||||| |||||||| |||||||||||||||||||||||||| ||| ||| ||| 
Sbjct: 850  gtctgggcttcgggtttctcagcagcttttctaaaaaagaacagtgtcgcttcaaaagta 909

                                                                        
Query: 61   catatgagttcaagtga------tgtggaggtatttgttggcggcaaaaaatttgtagaa 114
            ||| |||  ||||| ||      |||||||||||  |||||| | |||| ||||||||| 
Sbjct: 910  catttgaactcaagagagtcaagtgtggaggtatcagttggcagaaaaacatttgtagag 969

                                                                        
Query: 115  cccaaacctgcagcaactgaagcagctttattagtgattctggagaagttctttgaggtg 174
            |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||  |||
Sbjct: 970  cccaaacctgcagcaactgaagcagctttattggtgattctggagaagttttttggcgtg 1029

                                                                        
Query: 175  gttttgaattttcctgctgtgagtaggaggctctctgctgtgctaagcttattatcatca 234
            ||||||||| ||||| ||||||  ||||||||||| | |||||| || ||||||||||||
Sbjct: 1030 gttttgaatcttcctactgtgaacaggaggctctcagatgtgctgagtttattatcatca 1089

                                                                        
Query: 235  agacaacctacttgtccacagctatatatttatagcaccgcggatagagtcatccccgca 294
             ||||||| || ||||||||||| |||||||||||| | || ||||| |||||||| |||
Sbjct: 1090 ggacaaccaacctgtccacagctgtatatttatagctctgcagatagggtcatccctgca 1149

                                                                        
Query: 295  aagtctgtggagtcatttatacaagaacagcgaagagccgggcatgaggtcagggcttgc 354
            | |||||||||  |||||||| | || ||| ||| ||  |||||||||||||||||||||
Sbjct: 1150 aggtctgtggaaacatttatagaggagcagagaaaagtagggcatgaggtcagggcttgc 1209

                                                                        
Query: 355  aactttgtgtcctcaccacatgttgatcatttcagaaatgatccaaatctgtacagcact 414
            |||||||| ||| |||| |||||||||||||| ||||||||||| || |||||| |||||
Sbjct: 1210 aactttgtatccacacctcatgttgatcattttagaaatgatccgaaactgtacggcact 1269

                                                            
Query: 415  cagcttagccagtttttggatgattatgtgcttgcttgttgcaaacat 462
            ||||||||||||||| ||||||| | ||||||| ||||||||||||||
Sbjct: 1270 cagcttagccagtttctggatgactgtgtgcttacttgttgcaaacat 1317