Jatropha Genome Database

JcCB0361141.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0361141.10 + phase: 0 /partial
         (852 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29763.m000187 U4/U6.U5 tri-snRNP-associated protein, putative          94   2e-18

>29763.m000187 U4/U6.U5 tri-snRNP-associated protein, putative
          Length = 642

 Score = 93.7 bits (47), Expect = 2e-18
 Identities = 149/183 (81%)
 Strand = Plus / Plus

                                                                       
Query: 670 gatgaagatgaaattgagatgatgaagaaatttgggattccaattggctttgattcaaca 729
           ||||| ||||| |||||||||||||||||||| ||||||||| |||| |||||||| || 
Sbjct: 457 gatgaggatgagattgagatgatgaagaaattagggattccagttggttttgattcgacg 516

                                                                       
Query: 730 aaagggaaaccagtgcctggtgcagatgttagcggagtaagggttgttacgaagcgacag 789
           ||||| || || ||||||||||| ||||| || || || ||    ||||| ||||| |||
Sbjct: 517 aaaggaaagcctgtgcctggtgctgatgtgagtggcgttagacccgttactaagcggcag 576

                                                                       
Query: 790 cctcggcaatatatgaaccgtagaggaggatttaaccgtccattgcctccagagcggaat 849
           ||| |||| || ||||| ||  ||||||| || ||||| || |||||||| || || |||
Sbjct: 577 cctaggcagtacatgaatcgacgaggagggttcaaccggccgttgcctcctgaacgcaat 636

              
Query: 850 cgc 852
           |||
Sbjct: 637 cgc 639