Jatropha Genome Database
- JcCB0359851.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0359851.10 + phase: 0 /partial
(1380 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29703.m001490 pentatricopeptide repeat-containing protein, putative 603 e-171
>29703.m001490 pentatricopeptide repeat-containing protein, putative
Length = 2364
Score = 603 bits (304), Expect = e-171
Identities = 652/768 (84%)
Strand = Plus / Plus
Query: 216 tgatgcttggaatctgtttgaacagcacatgcagatagaaggatttcctcgtaaaaccat 275
|||||||||||| |||||||| | || |||||||| ||||| || |||| ||| | |
Sbjct: 327 tgatgcttggaagttgtttgaaaaacatatgcagatggaagggttccctcaaaaatctgt 386
Query: 276 tgtaaataaggttcttgcaagttttgcagaaagcatggatattcggtggcttgagaaggc 335
|||||||||| ||||||||||| |||| ||||||| ||| ||| |||||||||||||||
Sbjct: 387 tgtaaataagcttcttgcaagtattgcggaaagcaatgatgttccgtggcttgagaaggc 446
Query: 336 ttatggcttggtggaacaggctattggagaaagtaaacagaatttgttggaaaaagaggc 395
||||||||||||||||||||||||| ||||||||||| ||||| |||||||| || |
Sbjct: 447 ttatggcttggtggaacaggctattaaggaaagtaaacaaaatttattggaaaaggacac 506
Query: 396 tctaatatatctctcttatggtcttgctaaatgtggtttagtggttccagcatcaactat 455
||||| | |||||| | |||||||||||||||||||| |||| |||||||||| |
Sbjct: 507 actaatttttctctcattcaatcttgctaaatgtggtttagcagttctagcatcaactgt 566
Query: 456 tataagaaagttaatagaaatggaacaatatcctcctgtgactgcttggtctgcaatttt 515
| ||||||| || |||||||||||||| ||||||||||||||||| ||||||||||| ||
Sbjct: 567 tttaagaaaattgatagaaatggaacagtatcctcctgtgactgcctggtctgcaatatt 626
Query: 516 ggcccacatgtccttaacagctcctggagcttaccttgcttctgagttgatccttgagat 575
|| || ||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 627 agctcatatgtcgctaacagctcctggagcttaccttgctgctgagttgatccttgagat 686
Query: 576 aggttatttgttccaagatggcagagttgatccacgtaagaaaagcaatgcacctttgat 635
|||||| || ||||||||||||| || || || ||||| ||| |||||||| |||| ||
Sbjct: 687 aggttacttattccaagatggcaaggtggacccgcgtaaaaaatgcaatgcaactttaat 746
Query: 636 tgctatgaggcctaacactacttctatgaacattgctttggccgggtgtctcttgtttgg 695
|||||||| ||| || ||||| || |||||||||||||||| || ||||| |||||||
Sbjct: 747 tgctatgaagcccaatactacctcagtgaacattgctttggctggatgtcttgtgtttgg 806
Query: 696 taccacaaagaaagctgagcagctccttgacatgatgcctcgcatttttatcaaagttaa 755
||| |||| ||||||||| |||||||| ||| |||| |||||| || ||| ||||| ||
Sbjct: 807 tacaacaaggaaagctgaacagctcctggacctgatacctcgcgttggtataaaagtgaa 866
Query: 756 tgcagctttattgatcacgatggcaaatatatatgaaaggaatgggagaagagaagagtt 815
|||| | ||||||||||| ||||| |||||||||| ||||| ||||||||| |||| |
Sbjct: 867 tgcaacgttattgatcacaatggcgcatatatatgagaggaacgggagaagacaagaact 926
Query: 816 gaagaaacttcagagacatgtggatgaagctcaaggtttaagtgatattcaatttcggca 875
|| ||||||||| |||||| | |||||||| || || ||||||||||||| | ||||||
Sbjct: 927 gatgaaacttcaaagacatatagatgaagcccatagtataagtgatattcagtatcggca 986
Query: 876 gttctataattgtttgttaacatgccacttgaaatttggggatcttgattctgcatctag 935
||||||||||||| | || |||||||||||||||||||||||||||||||||| |||
Sbjct: 987 gttctataattgtctactatcatgccacttgaaatttggggatcttgattctgcttctga 1046
Query: 936 catggttttgaaaatgcttcggaaagcaaaggaggtacggaattctct 983
|||||| ||||||||||| ||||||||||||| | ||||||||||||
Sbjct: 1047 catggtcttgaaaatgctgtggaaagcaaaggaagcacggaattctct 1094
Score = 200 bits (101), Expect = 2e-50
Identities = 245/293 (83%)
Strand = Plus / Plus
Query: 1084 cctatgatttcttatgatgagttcttgaaagatcaaaagtttttgaaacttgatgcagag 1143
|||||||||||| ||| ||||||||||| || | | ||||| |||||||||||||||
Sbjct: 1213 cctatgatttctcatggggagttcttgaaggaccgggactttttaaaacttgatgcagag 1272
Query: 1144 gcaaaggaacttcttaattctttgctatcaaagttgcaggcacaagttgtattgattacc 1203
|| || | ||| ||| |||||||| || ||||||||||| | ||||||| |||||||||
Sbjct: 1273 gccaaaggactacttgattctttgttagcaaagttgcagactcaagttgaattgattaca 1332
Query: 1204 actgaccggggtgttcttcagcctactgataaaatttatgtgaaactggtcaaggcattt 1263
||||| || ||| |||||||||| ||||| ||| ||||||| || |||||||| || |||
Sbjct: 1333 actgatcgaggtattcttcagccaactgaaaaagtttatgtcaagctggtcaaagctttt 1392
Query: 1264 ttggaagctggcaagaccaaggagctggccagctttcttaaccaggctgagaaagaagat 1323
| ||| |||||||||| |||||| |||| ||| ||| || |||| ||||||||||||
Sbjct: 1393 ctagaatctggcaagactaaggagttggctgccttcctttacaaggcagagaaagaagat 1452
Query: 1324 tctcctgcttctaatgatgattcaatcttggttaatgtcattaattcatgcat 1376
|| ||| ||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 1453 tccccttcttctaatgatgattcacccttggttcatgtcattaattcatgcat 1505