Jatropha Genome Database

JcCB0359061.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0359061.20 - phase: 0 
         (396 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29869.m001150 conserved hypothetical protein                           54   6e-07

>29869.m001150 conserved hypothetical protein
          Length = 390

 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 280 gaacaacggttaaatcttttgcgtagaaagcaccttttgagag 322
           |||||| |||||||||||||| | ||||||||||||| |||||
Sbjct: 277 gaacaaaggttaaatcttttgtggagaaagcacctttcgagag 319



 Score = 52.0 bits (26), Expect = 3e-06
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 357 ttggattcctgcactacaaagcattcctgaggag 390
           |||| |||||||||| ||||||||||||||||||
Sbjct: 351 ttgggttcctgcacttcaaagcattcctgaggag 384