Jatropha Genome Database

JcCB0357881.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0357881.10 + phase: 0 /partial/short
         (99 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29970.m000990 chromatin binding protein, putative                      82   6e-16

>29970.m000990 chromatin binding protein, putative
          Length = 957

 Score = 81.8 bits (41), Expect = 6e-16
 Identities = 65/73 (89%)
 Strand = Plus / Plus

                                                                       
Query: 25  gagaataaacagggtgttgataagacatcaaagcttggacgctcagcacagactaagcca 84
           ||||| ||||||||||| || ||||  |||||||||||||| |||||||| |||||||||
Sbjct: 280 gagaaaaaacagggtgtagacaagagttcaaagcttggacgttcagcacaaactaagcca 339

                        
Query: 85  aaaagctctactg 97
           |||| ||||||||
Sbjct: 340 aaaacctctactg 352