Jatropha Genome Database

JcCB0356581.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0356581.10 - phase: 1 /partial
         (392 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28320.m001109 choline/ethanolamine kinase, putative                   404   e-112

>28320.m001109 choline/ethanolamine kinase, putative
          Length = 981

 Score =  404 bits (204), Expect = e-112
 Identities = 329/373 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   ataaactctactttattgattttgagtatggatcctacagttacagagggtatgacattg 60
           ||||||||||||| |||||||||||||| || || |||||||||||||| | ||||||||
Sbjct: 587 ataaactctacttcattgattttgagtacgggtcatacagttacagaggttttgacattg 646

                                                                       
Query: 61  caaatcacttcaacgaatatgcgggttatgattgtgattatagcttatacccgagtaagg 120
             ||||||||||||||||||||||||||||| ||||| || ||||||||||| |||||||
Sbjct: 647 ggaatcacttcaacgaatatgcgggttatgactgtgactacagcttataccctagtaagg 706

                                                                       
Query: 121 atgaacaatatcatttcttcaggcattatctacaacctgataaacctcatgaggtatctg 180
           ||||||||||||||||||||||||||||| | ||||| || |||||  ||||||||||||
Sbjct: 707 atgaacaatatcatttcttcaggcattatttgcaaccggacaaaccatatgaggtatctg 766

                                                                       
Query: 181 acagggaccttgaagctctatacatagaggcaaatacattcatgttagcttcacacnnnn 240
           ||| ||||||||||||| ||||||||||| ||||||| ||||||||||| ||||||    
Sbjct: 767 acaaggaccttgaagctttatacatagagacaaatactttcatgttagcatcacacttat 826

                                                                       
Query: 241 nnngggccttatgggcactaatccaggcaaagatgtctccaatcgattttgattatctgg 300
              |||| ||||||||||| ||||||||||||||||||||||| || ||||||||||| |
Sbjct: 827 tttgggcattatgggcactgatccaggcaaagatgtctccaattgagtttgattatcttg 886

                                                                       
Query: 301 gctatttcttcctgcgatacaatgaatacaagaagcaaaaggaaatgagtagttcattgg 360
           ||||||||||||| |||||||| || ||||| | ||| ||||||| |||| |||||||||
Sbjct: 887 gctatttcttcctacgatacaacgagtacaaaaggcagaaggaaaagagttgttcattgg 946

                        
Query: 361 cactttcttacct 373
           ||| |||||||||
Sbjct: 947 cacgttcttacct 959