Jatropha Genome Database
- JcCB0353461.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0353461.10 - phase: 2 /partial
(838 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29848.m004493 Salt-tolerance protein, putative 141 8e-33
29496.m000135 zinc finger protein, putative 64 1e-09
>29848.m004493 Salt-tolerance protein, putative
Length = 999
Score = 141 bits (71), Expect = 8e-33
Identities = 295/369 (79%), Gaps = 3/369 (0%)
Strand = Plus / Plus
Query: 191 gccgatgtcagcagagaggaagcagaagcagcctcttggcttcttccaaaccctcccaac 250
|||||||| || ||||| ||||| |||||||| || ||||| |||||||| ||||| |||
Sbjct: 370 gccgatgttagtagagaagaagctgaagcagcatcgtggctacttccaaatcctccaaac 429
Query: 251 cctaaagttatggaaagtccggatctgaatacgggtcagtatgtgttctcagaaatggaa 310
|||| || |||| | | |||||| ||||||||||||||||| ||||| || |||||
Sbjct: 430 actaagcttgtggagaattcggatccaaatacgggtcagtatgttttctcggatatggat 489
Query: 311 ccgtatctggatctagattacgggcctgtggatccaaaacttgaatcacaagagcagaat 370
||||| |||||||| |||||||| |||| ||||| ||||||||| | || ||||||||
Sbjct: 490 ccgtacctggatctggattacggacctggagatcctaaacttgaagcgcaggagcagaac 549
Query: 371 agctcaggcacagatggcgttgtacctgtaca---aagcaagagcgttcaaactccattg 427
|| || || ||||| |||||||| || || | || || | ||||||| |||| ||
Sbjct: 550 agttccggaacagacggcgttgttccggttaagagtagtaaaaacgttcaagctccgttt 609
Query: 428 gtgaacgatcactgttttgagcttgacttctctggatccaaagcttttgcttacggctac 487
|| ||||| |||| ||||||||||||||| |||||||||| ||||| ||||||| ||
Sbjct: 610 gttaacgacaactgctttgagcttgacttcactggatccaagccttttccttacggttat 669
Query: 488 aaagcgcaatgcctgagccacagtgtgtcttcctcatctctggacgtcggagttgttcca 547
|| || |||||||| ||| | || || || || ||||| || ||||||||||| || |||
Sbjct: 670 aacgcacaatgccttagcaatagcgtatcatcgtcatcgctagacgtcggagtggtgcca 729
Query: 548 gatggcggg 556
|| ||||||
Sbjct: 730 gacggcggg 738
Score = 133 bits (67), Expect = 2e-30
Identities = 177/213 (83%), Gaps = 3/213 (1%)
Strand = Plus / Plus
Query: 629 cagctatcagcagtggacagagaagcgagggtgttgaggtacagagaaaagagaaagaac 688
|||||||| ||||| ||||||||||| ||||| || ||||||||||| || || ||||||
Sbjct: 784 cagctatcggcagttgacagagaagccagggtattaaggtacagagagaaaaggaagaac 843
Query: 689 agaaagttcgagaagacaattagatacgcatcgaggaaagcttatgcagaaacaaggccg 748
|||||||||||||| |||||||||||||| ||| | |||||||| || |||||||| ||
Sbjct: 844 agaaagttcgagaaaacaattagatacgcgtcgcgaaaagcttacgccgaaacaagacca 903
Query: 749 cggatcaaaggaagatttgcaaagcgaaccgacactgaagttgaagtggatc---gcagt 805
| |||||||||||||| || || || || || | || || |||| |||| | |||
Sbjct: 904 agaatcaaaggaagattcgcgaaacgtacagatatagacgtcgaagctgatcgtagtagt 963
Query: 806 agtatctacggattcggcgtcgttccgtcgttt 838
|||||| ||| ||||||||||||||||||||||
Sbjct: 964 agtatcaacgcattcggcgtcgttccgtcgttt 996
>29496.m000135 zinc finger protein, putative
Length = 1137
Score = 63.9 bits (32), Expect = 1e-09
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 692 aagttcgagaagacaattagatacgcatcgaggaaagcttatgcagaaacaaggccgcgg 751
||||| ||||| |||||||| || || |||||||| || ||||||||||| || ||||||
Sbjct: 970 aagtttgagaaaacaattaggtatgcctcgaggaaggcatatgcagaaactagaccgcgg 1029
Query: 752 atcaaagg 759
||||||||
Sbjct: 1030 atcaaagg 1037