Jatropha Genome Database

JcCB0352111.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0352111.10 - phase: 0 /partial
         (186 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27553.m000321 Cofactor required for Sp1 transcriptional activati...   180   2e-45

>27553.m000321 Cofactor required for Sp1 transcriptional activation
           subunit, putative
          Length = 507

 Score =  180 bits (91), Expect = 2e-45
 Identities = 157/179 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   atatttaagaacttgcatcaccttctaaattctttgcggccccatcaggctcgagccacg 60
           ||||||||||| |||||||| || || ||||| ||||| || ||||||||| ||||||| 
Sbjct: 325 atatttaagaatttgcatcatctgctcaattcattgcgccctcatcaggctagagccaca 384

                                                                       
Query: 61  ctgattcatattctagagcttcagatacaacggcgtaaacaagctgttgaggatattaag 120
            | |||||||||||||||||||| || ||||| ||||||||||| || ||||||||||||
Sbjct: 385 ttaattcatattctagagcttcaaattcaacgtcgtaaacaagcagtggaggatattaag 444

                                                                      
Query: 121 gggaggagagaagaagcacagaaacttctcaaggaggctctcggaactttagatggcca 179
            ||||||| ||||||||||| |||||||||||||||||||| |||||| | ||||||||
Sbjct: 445 aggaggagggaagaagcacaaaaacttctcaaggaggctcttggaactctggatggcca 503