Jatropha Genome Database
- JcCB0349561.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0349561.10 + phase: 0 /partial
(1260 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30169.m006314 Casbene synthase, chloroplast precursor, putative 88 2e-16
29910.m000944 Terpinolene synthase, chloroplast precursor, putative 76 6e-13
30065.m001152 Casbene synthase, chloroplast precursor, putative 76 6e-13
29827.m002614 Casbene synthase, chloroplast precursor, putative 70 4e-11
30065.m001155 casbene synthase, putative 58 1e-07
>30169.m006314 Casbene synthase, chloroplast precursor, putative
Length = 1668
Score = 87.7 bits (44), Expect = 2e-16
Identities = 101/120 (84%)
Strand = Plus / Plus
Query: 225 aagagttgaggccaggcaatacatctctttttacgaagaagatgagtctcgaaatgaaac 284
|||||| ||||| ||||||||||| ||| || ||||||||||||||||| ||||||||
Sbjct: 609 aagagtggaggctaggcaatacataagtttctatgaagaagatgagtctcgcaatgaaac 668
Query: 285 cctacttgagtttgcaaaattagatttcaatcgagtacaattactacacaagcaagagct 344
|| ||| |||||||||| || ||||| ||||| |||| ||| | ||||||||||||||
Sbjct: 669 tcttcttaagtttgcaaagttggattttaatcggttacagttattgcacaagcaagagct 728
Score = 73.8 bits (37), Expect = 2e-12
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 50 ttctcagcttatatgaagcaagttttgtaagtgtgcatgaagaagatattctagatgaag 109
|||| |||||||| ||||| |||||| |||||||||||| |||| |||||||||||||||
Sbjct: 440 ttcttagcttatacgaagcgagttttctaagtgtgcatggagaaaatattctagatgaag 499
Query: 110 c 110
|
Sbjct: 500 c 500
Score = 73.8 bits (37), Expect = 2e-12
Identities = 115/141 (81%)
Strand = Plus / Plus
Query: 965 aggatgagcaaaagaggggagactgtgcttcaagtgtggagtgttacacaaaagaatatg 1024
|||||||||||||||||||| | |||||||||||| | || || |||| ||||||||||
Sbjct: 1373 aggatgagcaaaagaggggacattgtgcttcaagtatagaatgctacatgaaagaatatg 1432
Query: 1025 gtgttacagaagaaaaagcagttgaagaaatcttgaaaatatgtggaaatgcatggaaag 1084
|||| | ||| | ||||| | ||||| || |||||||||| ||||||||||||||
Sbjct: 1433 gtgtgtccgaaaagaaagccatagaagagattcaaaaaatatgtgcaaatgcatggaaag 1492
Query: 1085 atattaacgaagaatgcatga 1105
| || ||||| || |||||||
Sbjct: 1493 acatgaacgaggagtgcatga 1513
>29910.m000944 Terpinolene synthase, chloroplast precursor, putative
Length = 1431
Score = 75.8 bits (38), Expect = 6e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 55 agcttatatgaagcaagttttgtaagtgtgcatgaagaagatattctagatgaagctctt 114
|||||||| ||||| | ||| |||||||||||| |||||||||| |||||||||| |||
Sbjct: 355 agcttatacgaagccacctttctaagtgtgcatggagaagatattttagatgaagcactt 414
Query: 115 gcttttacaa 124
||||||||||
Sbjct: 415 gcttttacaa 424
>30065.m001152 Casbene synthase, chloroplast precursor, putative
Length = 849
Score = 75.8 bits (38), Expect = 6e-13
Identities = 125/154 (81%)
Strand = Plus / Plus
Query: 932 ttggtcgtttgttgaacgacatagtatcccacaaggatgagcaaaagaggggagactgtg 991
|||||||| || |||| ||||||| |||||| |||||||||||||||||||| | ||||
Sbjct: 521 ttggtcgtctgatgaatgacatagcatcccatgaggatgagcaaaagaggggacattgtg 580
Query: 992 cttcaagtgtggagtgttacacaaaagaatatggtgttacagaagaaaaagcagttgaag 1051
|||| | | ||||| || | || ||||||||||| ||||| | ||||| ||||||
Sbjct: 581 cttcggctatagagtgctatatgaaccaatatggtgtttcagaaaagaaagccattgaag 640
Query: 1052 aaatcttgaaaatatgtggaaatgcatggaaaga 1085
| || ||||||||||||| |||||||||||||
Sbjct: 641 agattcagaaaatatgtggatatgcatggaaaga 674
>29827.m002614 Casbene synthase, chloroplast precursor, putative
Length = 1656
Score = 69.9 bits (35), Expect = 4e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 959 cccacaaggatgagcaaaagaggggagactgtgcttcaagtgtggagtgttacacaaaag 1018
||||| |||| |||||||||||||||||||| |||||||||||||||| |||| || |
Sbjct: 1358 cccacgaggaagagcaaaagaggggagactgcccttcaagtgtggagtgctacatgaatg 1417
Query: 1019 aatatgg 1025
|||||||
Sbjct: 1418 aatatgg 1424
>30065.m001155 casbene synthase, putative
Length = 471
Score = 58.0 bits (29), Expect = 1e-07
Identities = 92/113 (81%)
Strand = Plus / Plus
Query: 232 gaggccaggcaatacatctctttttacgaagaagatgagtctcgaaatgaaaccctactt 291
||||| ||||||||||||| ||| || | ||||||||||| | |||||||| || |||
Sbjct: 148 gaggctaggcaatacatctgtttctatagaaaagatgagtcttgcaatgaaactctcctt 207
Query: 292 gagtttgcaaaattagatttcaatcgagtacaattactacacaagcaagagct 344
|||||||||| || ||||| ||||| |||||||| | |||| ||||||||
Sbjct: 208 aagtttgcaaagttggattttaatcggttacaattattgtacaaacaagagct 260