Jatropha Genome Database

JcCB0347911.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0347911.10 + phase: 0 /partial
         (950 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28623.m000407 GDP mannose-4,6-dehydratase, putative                   295   2e-79

>28623.m000407 GDP mannose-4,6-dehydratase, putative
          Length = 714

 Score =  295 bits (149), Expect = 2e-79
 Identities = 338/401 (84%)
 Strand = Plus / Plus

                                                                       
Query: 535 tttcatcctagatctccatacgcagcgtcgaaatgtgctgcgcattggtacacagttaat 594
           |||||||| |||||||||||||||||||||||||| ||||| ||||||||||| ||||||
Sbjct: 43  tttcatccaagatctccatacgcagcgtcgaaatgcgctgcccattggtacactgttaat 102

                                                                       
Query: 595 taccgtgaggcttacgggttgtttgcttgtaacggaatcctgttcaaccacgaatcgcca 654
           ||| | ||||| |||||||||||||| ||||| || ||  |||| ||||| ||||| |||
Sbjct: 103 tacagggaggcgtacgggttgtttgcctgtaatgggatattgtttaaccatgaatctcca 162

                                                                       
Query: 655 aggcgtggagagaatttcgttactaggaaaataacgagagcagttggtagaattaagact 714
           ||||| |||||||||||||| ||| | || ||||| || || || || || || |||| |
Sbjct: 163 aggcgaggagagaatttcgtgactcgaaagataacaagggctgtcggaaggatcaagatt 222

                                                                       
Query: 715 ggattacagaacaaattgttcttgggcaatttgagtgcctcaagagattggggatttgcg 774
           || || || | |||| ||||  | |||||||||| ||| || ||||||||||| || || 
Sbjct: 223 gggttgcaaagcaaactgtttctaggcaatttgaatgcgtcgagagattggggtttcgct 282

                                                                       
Query: 775 ggagattatgtagaagcgatgtggatgatgctgcagcaagaaatgccagacgattatgta 834
           || |||||||| ||||| |||||||||||| | || ||||| | ||| ||||||||||| 
Sbjct: 283 ggggattatgttgaagctatgtggatgatgttacaacaagagaagcctgacgattatgtt 342

                                                                       
Query: 835 gtggctactgaggagtcgcatacggtggaggaatttttggaagtggcatttgggtatgtg 894
           ||||| ||||||||||||||||| |||||||| |||||  ||||||||||||||||||||
Sbjct: 343 gtggcaactgaggagtcgcatactgtggaggagtttttacaagtggcatttgggtatgtg 402

                                                    
Query: 895 ggattgaactggaaagatcatgtggtgattgataaaaggta 935
           ||  |||| |||||||| |||||||||||||| || |||||
Sbjct: 403 ggtctgaattggaaagaccatgtggtgattgacaagaggta 443