Jatropha Genome Database
- JcCB0343111.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0343111.10 - phase: 0 /partial
(906 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m014170 conserved hypothetical protein 226 2e-58
>30170.m014170 conserved hypothetical protein
Length = 765
Score = 226 bits (114), Expect = 2e-58
Identities = 296/356 (83%), Gaps = 3/356 (0%)
Strand = Plus / Plus
Query: 265 actacttatgtgtatgattctttcttcaaaccatatgttgcaaagcatgagaatgaaatt 324
||||| |||||||||||||| ||||||| ||||||||| |||||||||||||||||||||
Sbjct: 130 actacctatgtgtatgattccttcttcagaccatatgtagcaaagcatgagaatgaaatt 189
Query: 325 gatcgcagtttgttggaactaagaacgagagctggagatatgtttattttatactggcag 384
||||||| ||||||||||||||||| || ||||| |||||| |||||||||||||
Sbjct: 190 gatcgcaacttgttggaactaagaactagggctggcgatatggcagttttatactggcaa 249
Query: 385 agggctgcaagctatggtcaaacaagagtttttgatattttgcaatatgttgcttcacag 444
|| |||||||| |||||||| |||||| ||||||| |||||||| |||||||| | |||
Sbjct: 250 agagctgcaagttatggtcagacaagaatttttgagattttgcagtatgttgcggcgcag 309
Query: 445 tcaacaacaccaaggcctcgtgctgctcagccacagcaaggtactaggactcgccaacct 504
| | |||||||||||||| || |||||||||| |||||| |||| | || ||||||
Sbjct: 310 t---cgacaccaaggcctcgccctactcagccacaacaaggtgttagggcccgacaacct 366
Query: 505 gctaatgctccaacccgccaaccttctactacttccaactgtcagccagctgtgcagcaa 564
|| | ||| ||| ||| ||| |||||| ||||||||| | || |||||||| |||
Sbjct: 367 gccactgccacaaaccgtcaatcttctaatacttccaatcgccaaccagctgtagctcaa 426
Query: 565 ccagagactgaagaacctccatcccccacttctagcacatcttcaagtcggcacca 620
||||||| |||||||||||| || ||||| || || |||||||| |||| ||||||
Sbjct: 427 ccagagaatgaagaacctccgtctcccacctccagtacatcttccagtcagcacca 482
Score = 167 bits (84), Expect = 1e-40
Identities = 111/120 (92%)
Strand = Plus / Plus
Query: 42 gatgatttttggctatgcttatcctgcctatgagtgctacaaaactgttgagaagaataa 101
|||||| |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||
Sbjct: 6 gatgatctttggctatgcttatcctgcttatgagtgctataaaactgttgaaaagaataa 65
Query: 102 gccagaaattgagcatcttcgattttggtgccagtactggattttggtggctgtgttgac 161
|||||||||||| || ||| |||||||||||||||| ||||||||||||||||| |||||
Sbjct: 66 gccagaaattgaacaacttagattttggtgccagtattggattttggtggctgtattgac 125
Score = 131 bits (66), Expect = 8e-30
Identities = 140/164 (85%), Gaps = 3/164 (1%)
Strand = Plus / Plus
Query: 742 gaaacttccagccagccttcatcaagcaaggcagaggcaatggagattgaagctgaacct 801
||||||||||| ||||||||||||| ||| ||||| | |||| | || ||||| | ||||
Sbjct: 595 gaaacttccagtcagccttcatcaaccaaagcagaagtaatgcaaatcgaagcagcacct 654
Query: 802 tca---aaaaatgaaaatgcaaatcctcctccaaaagacactaacatggacgaagccatt 858
||| | ||||||||||| ||||||||| |||||||| ||||||||||| || ||||||
Sbjct: 655 tcatcaacaaatgaaaatgaaaatcctcccccaaaagagactaacatggatgaggccatt 714
Query: 859 cggagaacaagtgccagattgaggaaaagccgatctgcaccaaa 902
||| ||| ||||||||||||||||||||||||||| ||||||
Sbjct: 715 cgggttacacgtgccagattgaggaaaagccgatctggaccaaa 758