Jatropha Genome Database
- JcCB0341121.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0341121.10 + phase: 0 /partial
(711 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
27887.m000072 Protein kinase APK1B, chloroplast precursor, putative 749 0.0
30028.m000253 Protein kinase APK1A, chloroplast precursor, putative 351 4e-96
27383.m000157 Protein kinase APK1B, chloroplast precursor, putative 103 1e-21
29587.m000232 conserved hypothetical protein 76 3e-13
30108.m000234 conserved hypothetical protein 70 2e-11
29666.m001472 receptor serine-threonine protein kinase, putative 60 2e-08
30018.m000550 Protein kinase APK1B, chloroplast precursor, putative 56 3e-07
29736.m002016 Protein kinase APK1A, chloroplast precursor, putative 54 1e-06
29907.m000656 serine-threonine protein kinase, plant-type, putative 54 1e-06
30074.m001369 Receptor protein kinase CLAVATA1 precursor, putative 54 1e-06
30143.m001189 kinase, putative 52 5e-06
>27887.m000072 Protein kinase APK1B, chloroplast precursor, putative
Length = 1170
Score = 749 bits (378), Expect = 0.0
Identities = 623/707 (88%)
Strand = Plus / Plus
Query: 1 gcagagatcaactatcttgggcaattggagcatcctaatcttgttaagttgattggttac 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 370 gcagagatcaactatcttgggcaattgcagcatcctaatcttgttaagttgataggttac 429
Query: 61 tgctttgaggatgaccatcgccttttggtctatgagtttatgccccgtggcagcatggag 120
|||||||||||||||||||| ||| |||| ||||| |||||||| |||||||||||||||
Sbjct: 430 tgctttgaggatgaccatcggcttctggtttatgaatttatgcctcgtggcagcatggag 489
Query: 121 aatcatttatttaggagaggctctcatttccagccactttcttggaacattcgtatgaaa 180
|||||||||||||||||||| ||||| |||||||| ||||||||||||||||| ||||||
Sbjct: 490 aatcatttatttaggagaggatctcacttccagcctctttcttggaacattcgcatgaaa 549
Query: 181 gttgctcttggtgctgcaaaagggcttgcatttcttcatagtgctgatgcaaaagtcata 240
|||||||| ||||| ||||| |||||||||||||||||| || ||| |||||||||||
Sbjct: 550 gttgctctaggtgcagcaaaggggcttgcatttcttcatgatgatgacgcaaaagtcatt 609
Query: 241 tatcgggacttcaagacttctaatatactgcttgatacaaactacaatgcaaagctttct 300
|||||||||||||||||||||||||| ||||||||| |||| |||||||| |||||||||
Sbjct: 610 tatcgggacttcaagacttctaatattctgcttgattcaaaatacaatgcgaagctttct 669
Query: 301 gattttggtttagccagggatgggccaactggtgataagagccatgtgtccacaagggtc 360
|||||||| || ||||||||||| ||||| |||||||| || ||||| || || ||||||
Sbjct: 670 gattttggcttggccagggatggaccaaccggtgataaaagtcatgtctctactagggtc 729
Query: 361 atgggaacttatggatatgctgcaccagagtatttagccacaggccatttgactgctaag 420
|||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||
Sbjct: 730 atgggaacttatggatatgccgcaccagagtatttagccacaggtcatttgactgcgaag 789
Query: 421 agcgatgtatacagctttggagttgtacttctagaaattttatctggtcgacgagctgta 480
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||
Sbjct: 790 agcgatgtatacagctttggagttgtacttctagaaatgttatctggccgacgagctata 849
Query: 481 gacaaaaatcgaccatctgggcaacataacctggtggagtgggcaaagccttacctgaca 540
||||| ||||| ||| |||||||||| || || |||||||||||||| |||||||| |||
Sbjct: 850 gacaagaatcggccaactgggcaacacaatctagtggagtgggcaaaaccttaccttaca 909
Query: 541 aacnnnnnnngagttttccgcattttggacacacgtcttgatggtcagtactcccttacc 600
||| ||||| ||| || |||| || ||| |||| || || ||||| ||||
Sbjct: 910 aacaaacgcagagttctccatgttctggatacgcgtattgaaggccaatactctcttagt 969
Query: 601 cgggctcaaaaggtggctaaccttgcacttaattgcttagatgtagaaccaaagttcaga 660
|| ||||| |||||||| | |||| || || | |||||||||||||||||||| |||||
Sbjct: 970 cgagctcagaaggtggccagccttacagttcaatgcttagatgtagaaccaaaattcagg 1029
Query: 661 ccaaacatggaggaagtggtaaaggcattagaggaagttcaagaatc 707
|||| |||||| |||||||| ||||||||||| | ||||||||||
Sbjct: 1030 ccaagcatggatgaagtggtccaggcattagagcagcttcaagaatc 1076
>30028.m000253 Protein kinase APK1A, chloroplast precursor, putative
Length = 1011
Score = 351 bits (177), Expect = 4e-96
Identities = 429/513 (83%)
Strand = Plus / Plus
Query: 31 catcctaatcttgttaagttgattggttactgctttgaggatgaccatcgccttttggtc 90
|||||||||||||| ||| |||||||||| ||||| |||||||| || || ||||||||
Sbjct: 199 catcctaatcttgtgaagctgattggttattgcttagaggatgaacaccggcttttggtg 258
Query: 91 tatgagtttatgccccgtggcagcatggagaatcatttatttaggagaggctctcatttc 150
|||||||| ||||| || |||||| |||| |||||||||||||||||||| ||| | |||
Sbjct: 259 tatgagttcatgcctcggggcagcttggaaaatcatttatttaggagaggatcttacttc 318
Query: 151 cagccactttcttggaacattcgtatgaaagttgctcttggtgctgcaaaagggcttgca 210
|| || ||||||||||| | || |||||||||||||||||||||||||||||||||||
Sbjct: 319 caacctctttcttggaatctccgcttgaaagttgctcttggtgctgcaaaagggcttgca 378
Query: 211 tttcttcatagtgctgatgcaaaagtcatatatcgggacttcaagacttctaatatactg 270
||||||||||||||||| ||||| |||||||||||||||||||| || ||||| ||
Sbjct: 379 tttcttcatagtgctgaaaataaagttatatatcgggacttcaagacgtccaatattcta 438
Query: 271 cttgatacaaactacaatgcaaagctttctgattttggtttagccagggatgggccaact 330
|||||| | ||||||||||||||||| ||||||||||| || |||| |||||| |||||
Sbjct: 439 cttgattctaactacaatgcaaagctctctgattttgggttggccaaggatggcccaaca 498
Query: 331 ggtgataagagccatgtgtccacaagggtcatgggaacttatggatatgctgcaccagag 390
|||||||| || ||||| || || ||||| ||||| || ||||||||||| || || ||
Sbjct: 499 ggtgataaaagtcatgtctctactagggttatgggtacctatggatatgcagctccggaa 558
Query: 391 tatttagccacaggccatttgactgctaagagcgatgtatacagctttggagttgtactt 450
||| |||||||||| ||||| ||||| | ||| ||||| || |||||||||||||| |
Sbjct: 559 tatctagccacaggtcatttaactgccaggagtgatgtctatagctttggagttgttttg 618
Query: 451 ctagaaattttatctggtcgacgagctgtagacaaaaatcgaccatctgggcaacataac 510
||||||| || ||||| | |||| | || |||||||| |||||||| |||| ||
Sbjct: 619 ttagaaatgttgtctggcaggagagcaattgataaaaatcggccatctggagaacacaat 678
Query: 511 ctggtggagtgggcaaagccttacctgacaaac 543
|| ||||| ||||| ||||| |||||| |||||
Sbjct: 679 cttgtggaatgggctaagccctacctggcaaac 711
>27383.m000157 Protein kinase APK1B, chloroplast precursor, putative
Length = 1233
Score = 103 bits (52), Expect = 1e-21
Identities = 379/488 (77%)
Strand = Plus / Plus
Query: 1 gcagagatcaactatcttgggcaattggagcatcctaatcttgttaagttgattggttac 60
||||| |||||||| ||||| || || || || || |||||||| || |||||||| |||
Sbjct: 364 gcagaaatcaactaccttggtcagttagatcacccgaatcttgtgaaattgattggatac 423
Query: 61 tgctttgaggatgaccatcgccttttggtctatgagtttatgccccgtggcagcatggag 120
||||| |||||||| ||||| ||| |||| |||||||||||||| |||||| |||||
Sbjct: 424 tgcttagaggatgatcatcgacttctggtttatgagtttatgccaaagggcagcttggag 483
Query: 121 aatcatttatttaggagaggctctcatttccagccactttcttggaacattcgtatgaaa 180
|| || ||||||| || | ||| || | || ||||| |||||||| | ||||| |
Sbjct: 484 aaccacctatttagaagggcttcttatgttcaaccactctcttggaatctccgtattcag 543
Query: 181 gttgctcttggtgctgcaaaagggcttgcatttcttcatagtgctgatgcaaaagtcata 240
|||| |||| ||||| ||||| || || |||||||| |||| | | || ||||| |||
Sbjct: 544 attgcccttgacgctgctaaaggcctagcttttcttcacagtgataaggccaaagtgata 603
Query: 241 tatcgggacttcaagacttctaatatactgcttgatacaaactacaatgcaaagctttct 300
|| || ||||| ||| | |||||||| ||||| ||| ||||||| | || || || |||
Sbjct: 604 taccgagactttaaggcctctaatatcctgctcgattcaaactatagagccaaactctct 663
Query: 301 gattttggtttagccagggatgggccaactggtgataagagccatgtgtccacaagggtc 360
|| ||||| || || | |||||||||||| ||| ||| |||||||| || ||||| ||
Sbjct: 664 gactttgggttggcaaaggatgggccaacaggtagtaaaagccatgtttcaacaagagta 723
Query: 361 atgggaacttatggatatgctgcaccagagtatttagccacaggccatttgactgctaag 420
||||| || ||||| ||||| || || || ||| | |||||||| ||| | ||| |||
Sbjct: 724 atgggtacgtatgggtatgcagctcctgaatatatggccacaggtcatctaactaaaaag 783
Query: 421 agcgatgtatacagctttggagttgtacttctagaaattttatctggtcgacgagctgta 480
|| || |||||||| ||||| ||||| || || ||||| |||| || | |||||| ||
Sbjct: 784 agtgacgtatacagttttggggttgttctccttgaaatgatatcagggaggcgagctata 843
Query: 481 gacaaaaa 488
||||||||
Sbjct: 844 gacaaaaa 851
>29587.m000232 conserved hypothetical protein
Length = 2119
Score = 75.8 bits (38), Expect = 3e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 31 catcctaatcttgttaagttgattggttactgctttgaggatgaccatcgccttttggtc 90
||||| |||||||| || ||||||||||||||||| |||||||| | || ||| |||||
Sbjct: 358 catccaaatcttgtgaaattgattggttactgcttgaaggatgactaccggcttctggtc 417
Query: 91 tatgagtttatgcc 104
||||||||||||||
Sbjct: 418 tatgagtttatgcc 431
>30108.m000234 conserved hypothetical protein
Length = 561
Score = 69.9 bits (35), Expect = 2e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 376 tatgctgcaccagagtatttagccacaggccatttgactgctaagagcgatgtatacagc 435
|||||||||||||||||| |||| ||||| || |||||| | ||||| ||||| ||||||
Sbjct: 121 tatgctgcaccagagtatgtagcaacaggtcacttgactccaaagagtgatgtgtacagc 180
Query: 436 tttggagttgt 446
||||| |||||
Sbjct: 181 tttggtgttgt 191
>29666.m001472 receptor serine-threonine protein kinase, putative
Length = 1158
Score = 60.0 bits (30), Expect = 2e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 325 ccaactggtgataagagccatgtgtccacaagggtcatgggaacttatgg 374
||||||||||| |||| |||||||||||||| || ||||||||||||||
Sbjct: 670 ccaactggtgacaagactcatgtgtccacaagagtgatgggaacttatgg 719
>30018.m000550 Protein kinase APK1B, chloroplast precursor, putative
Length = 1317
Score = 56.0 bits (28), Expect = 3e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 343 catgtgtccacaagggtcatgggaacttatggatatgctgcacc 386
||||| || ||| |||||||||| ||||||||||||||||||||
Sbjct: 763 catgtatcaacacgggtcatgggtacttatggatatgctgcacc 806
>29736.m002016 Protein kinase APK1A, chloroplast precursor, putative
Length = 1260
Score = 54.0 bits (27), Expect = 1e-06
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 50 tgattggttactgctttgaggatgaccatcgccttttggtctatgagtttatgcc 104
|||||||||||||||| |||| ||| | || || ||||||||||||||||||||
Sbjct: 458 tgattggttactgcttggagggtgagaaccggctattggtctatgagtttatgcc 512
>29907.m000656 serine-threonine protein kinase, plant-type, putative
Length = 633
Score = 54.0 bits (27), Expect = 1e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 418 aagagcgatgtatacagctttggagttgtacttctagaa 456
||||||||||||||||||||||| ||||| || ||||||
Sbjct: 310 aagagcgatgtatacagctttggcgttgtgctactagaa 348
>30074.m001369 Receptor protein kinase CLAVATA1 precursor, putative
Length = 2760
Score = 54.0 bits (27), Expect = 1e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 418 aagagcgatgtatacagctttggagttgtacttctagaa 456
||||||||||||||||||||||| ||||| || ||||||
Sbjct: 2437 aagagcgatgtatacagctttggcgttgtgctactagaa 2475
>30143.m001189 kinase, putative
Length = 1914
Score = 52.0 bits (26), Expect = 5e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 410 tgactgctaagagcgatgtatacagctttggagttgta 447
|||||| |||||||||||| || |||||||||||||||
Sbjct: 1580 tgactgataagagcgatgtttatagctttggagttgta 1617