Jatropha Genome Database
- JcCB0340161.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0340161.20 - phase: 2 /pseudo/partial
(925 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30128.m008781 lipoxygenase, putative 496 e-139
29680.m001710 lipoxygenase, putative 109 3e-23
29726.m003891 lipoxygenase, putative 64 2e-09
29468.m000030 lipoxygenase, putative 52 6e-06
>30128.m008781 lipoxygenase, putative
Length = 2616
Score = 496 bits (250), Expect = e-139
Identities = 517/606 (85%)
Strand = Plus / Plus
Query: 316 agatgatatggtcataaaggatcctgaacttcagtcatggtggaaagaaatccgtgaagt 375
|||||| ||||| | ||||||||||||||||||||| |||||||| ||| || | || ||
Sbjct: 2004 agatgacatggttaaaaaggatcctgaacttcagtcctggtggaaggaactcagggaggt 2063
Query: 376 aggccatggtgacaagaaagaagagccttggtggcccaagatgcatacaagagaagagct 435
||| ||||| ||||||||| | ||||| |||||||| |||||||| ||||| ||||||||
Sbjct: 2064 aggtcatggcgacaagaaacacgagccctggtggcctaagatgcagacaagggaagagct 2123
Query: 436 aatagaatcatgcactattatcatttggatagcatctgctcttcatgcagcaatcaactt 495
|||||||||||||| |||||||| |||| |||||||||||||||||| |||||||||||
Sbjct: 2124 gatagaatcatgcaccattatcatatggacagcatctgctcttcatgctgcaatcaactt 2183
Query: 496 tggtcaatatccttatggaggctaccttcctaatagacctagcataagccgcaggttttt 555
|| ||||| || || |||||||||||||||||| | |||||||||||||||||||| |
Sbjct: 2184 cggccaatacccgtacggaggctaccttcctaatcgtcctagcataagccgcaggttcat 2243
Query: 556 gcctgaaaaagacactcctgagtatgaagagcttaagtcgaaccccgaaaaagccttcct 615
||| ||||| | || ||||| ||||| ||||| ||| | || || || ||||| ||| |
Sbjct: 2244 gccagaaaagggaacccctgaatatgaggagctcaagactaatcctgacaaagctttctt 2303
Query: 616 taaaactattactgctcagttgcaaactgttcttggcatttctcttatagaaattctgtc 675
||||||| | ||||| ||| |||| ||||||||||||||||| ||||| ||||| ||||
Sbjct: 2304 taaaactgtcactgcccagctgcagactgttcttggcatttcccttattgaaatcttgtc 2363
Query: 676 aaggcatgcttcagatgaagtttatcttgggcagcgagacacacctgaatggacaacaga 735
||||||| | ||||| ||||| |||||||||||||| ||||| || ||||||||||| ||
Sbjct: 2364 aaggcattcatcagacgaagtgtatcttgggcagcgggacacgcccgaatggacaaccga 2423
Query: 736 tgagaagccattagaggcctttaaacaatttggaaagaagctggaaaagattgaggaggg 795
|| ||| |||||||||||||| |||||||||||||||||||||| || ||||| |
Sbjct: 2424 cagtaaaccactagaggcctttaaaaaatttggaaagaagctggaaaaaatcgaggacag 2483
Query: 796 tattatagagatgaataaagatgtgcaattgaagaaccgtgttggtcctgttttgatgac 855
|||||||||||||||||||||||| || ||||||||||| ||||||| ||||| || |
Sbjct: 2484 gattatagagatgaataaagatgtggaactgaagaaccgtattggtccagttttagtgcc 2543
Query: 856 ttacactttgttagttcctagcagtgaagttggactcactggtagaggaattcctaacag 915
||||| ||||||||||||||||| || |||||||| ||||| || ||||||||||||||
Sbjct: 2544 atacaccttgttagttcctagcagcgatgttggacttactggcaggggaattcctaacag 2603
Query: 916 tgtttc 921
||||||
Sbjct: 2604 tgtttc 2609
Score = 266 bits (134), Expect = 2e-70
Identities = 233/266 (87%)
Strand = Plus / Plus
Query: 53 ggttgcacactcatgcaacaatcgagccaattgtgattgcaacaaataggcaattaagtg 112
|||||||||||||||| |||| |||||| || | || |||||||||||||| ||||||
Sbjct: 1598 ggttgcacactcatgcggcaatggagccatttattatagcaacaaataggcatctaagtg 1657
Query: 113 tgcttcatccaatacacaaacttctacatcctcacttccgtgacacgatgaacataaatg 172
|||||||||| |||||||||||||| || || |||||||||||||| |||||||||||||
Sbjct: 1658 tgcttcatccgatacacaaacttctgcacccccacttccgtgacacaatgaacataaatg 1717
Query: 173 cagttgctagacagatacttattaatgctggtggattattggagttcacagtttttccag 232
||||||||||||| ||||| |||||||| |||||||| | ||||| || |||||||| |
Sbjct: 1718 cagttgctagacaaatactcattaatgccggtggattgctcgagtttactgtttttcctg 1777
Query: 233 caaagtattctatggaaatgacatcaattgcttacaaaagctggaattttagagagcaag 292
|||||||| | |||||||||||||| | |||||||||| ||||||||| | |||||||
Sbjct: 1778 caaagtatgcaatggaaatgacatccaaagcttacaaaaactggaatttcacggagcaag 1837
Query: 293 cacttcctgaagatttaaagaaaaga 318
|||||||||||||| |||||||||||
Sbjct: 1838 cacttcctgaagatctaaagaaaaga 1863
>29680.m001710 lipoxygenase, putative
Length = 2598
Score = 109 bits (55), Expect = 3e-23
Identities = 148/179 (82%)
Strand = Plus / Plus
Query: 380 catggtgacaagaaagaagagccttggtggcccaagatgcatacaagagaagagctaata 439
|||||||||||||||| || | |||||||| | |||||| || | ||||||| |||
Sbjct: 2047 catggtgacaagaaaggtgaactgtggtggccaaggatgcaaacgtgtaaagagctcata 2106
Query: 440 gaatcatgcactattatcatttggatagcatctgctcttcatgcagcaatcaactttggt 499
|| |||||||||| ||||| |||||||| || ||||| |||||||||||||| || ||
Sbjct: 2107 caaacatgcactatcatcatatggatagcttcagctctccatgcagcaatcaatttcgga 2166
Query: 500 caatatccttatggaggctaccttcctaatagacctagcataagccgcaggtttttgcc 558
|||||||||||||| || || || ||||| |||||| |||||||||||||||| ||||
Sbjct: 2167 caatatccttatggtggttatctccctaaccgacctaccataagccgcaggtttatgcc 2225
Score = 83.8 bits (42), Expect = 2e-15
Identities = 129/158 (81%)
Strand = Plus / Plus
Query: 83 ttgtgattgcaacaaataggcaattaagtgtgcttcatccaatacacaaacttctacatc 142
||||||| |||||||||||||| |||||||||||||||||||| | || ||| | ||||
Sbjct: 1607 ttgtgatcgcaacaaataggcatttaagtgtgcttcatccaatttataagcttttgcatc 1666
Query: 143 ctcacttccgtgacacgatgaacataaatgcagttgctagacagatacttattaatgctg 202
|||| ||| ||||| ||| | ||||||||| | ||||| ||||| || ||||||||||
Sbjct: 1667 ctcatttcaaagacacaatgtatataaatgcactagctaggcagattctcattaatgctg 1726
Query: 203 gtggattattggagttcacagtttttccagcaaagtat 240
| ||| | |||||| || |||||||| | |||||||
Sbjct: 1727 gaggagtgctggagtcaactgtttttcctggaaagtat 1764
Score = 52.0 bits (26), Expect = 6e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 645 ttcttggcatttctcttatagaaattctgtcaaggcat 682
||||||||||||| ||| ||||||||||||||| ||||
Sbjct: 2318 ttcttggcatttcccttgtagaaattctgtcaatgcat 2355
>29726.m003891 lipoxygenase, putative
Length = 2607
Score = 63.9 bits (32), Expect = 2e-09
Identities = 95/116 (81%)
Strand = Plus / Plus
Query: 88 attgcaacaaataggcaattaagtgtgcttcatccaatacacaaacttctacatcctcac 147
||||| ||||| || || |||||||| ||||| ||||| | || ||||| ||||| |||
Sbjct: 1609 attgccacaaacagacagttaagtgtacttcacccaatctataagcttctgcatccacac 1668
Query: 148 ttccgtgacacgatgaacataaatgcagttgctagacagatacttattaatgctgg 203
|||||||| || |||||||||||||| | ||||| ||||| || || ||||||||
Sbjct: 1669 ttccgtgatacaatgaacataaatgccttggctaggcagattctcatcaatgctgg 1724
>29468.m000030 lipoxygenase, putative
Length = 1338
Score = 52.0 bits (26), Expect = 6e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 456 tcatttggatagcatctgctcttcatgcagcaatcaactttggtcaatatccttatgg 513
|||||||| |||||||||||| ||||||||| |||| ||||| || ||||| |||||
Sbjct: 863 tcatttggctagcatctgctcaacatgcagcactcaattttgggcagtatccctatgg 920