Jatropha Genome Database

JcCB0340161.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0340161.10 - phase: 0 
         (270 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008782 DNA polymerase zeta catalytic subunit, putative         188   1e-47

>30128.m008782 DNA polymerase zeta catalytic subunit, putative
          Length = 6201

 Score =  188 bits (95), Expect = 1e-47
 Identities = 137/151 (90%)
 Strand = Plus / Plus

                                                                       
Query: 41  gaatcgtatcgatcgattactacatggcaccgccgatccctaacaccgatatttgctata 100
           |||||||||| || ||||||||||||||||| || |||||||||| ||||||||| || |
Sbjct: 41  gaatcgtatcaattgattactacatggcacctccaatccctaacatcgatatttgttaca 100

                                                                       
Query: 101 gtagctttcaaggtggaaaggtgaacgaggttcctgttgtaagggtttatggctcaactc 160
           |||||||||||||||| |||||||| |||||||||||| ||||| | ||||||||||| |
Sbjct: 101 gtagctttcaaggtgggaaggtgaatgaggttcctgttttaaggatatatggctcaacgc 160

                                          
Query: 161 ctgctggtcaaaagacttgcttgcatattca 191
           |||||||||||||||||||||||||| ||||
Sbjct: 161 ctgctggtcaaaagacttgcttgcatgttca 191