Jatropha Genome Database

JcCB0337681.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0337681.10 + phase: 0 /partial
         (231 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29986.m001646 sucrose synthase, putative                              192   6e-49
29726.m004086 sucrose synthase, putative                               52   1e-06

>29986.m001646 sucrose synthase, putative
          Length = 2328

 Score =  192 bits (97), Expect = 6e-49
 Identities = 181/209 (86%)
 Strand = Plus / Plus

                                                                       
Query: 22  cgaatccctagcatgagagagcgcgtagaagatactctctctgctcaccgaaatgaactt 81
           |||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| 
Sbjct: 22  cgaatccctagcatgagagagcgcgtggaagatactctctctgctcaccgtaacgaactc 81

                                                                       
Query: 82  gtttctcttctctgcaggtatgtggatcaagggaaaggaattttgcagccacacactttg 141
           |||||||| ||||||||||| ||||||||||| |||||||| ||||| || || ||||||
Sbjct: 82  gtttctctcctctgcaggtacgtggatcaaggtaaaggaatattgcaaccgcatactttg 141

                                                                       
Query: 142 atcgatgaactggatagtgttgtgggcgaggacggaacaaggctggggctaagagatggt 201
           || |||||| | |||| |||||| ||||| |  | | |||||| |  | ||||| |||||
Sbjct: 142 attgatgaatttgataatgttgttggcgatggtgaatcaaggcagatgttaagaaatggt 201

                                        
Query: 202 ccctttggcgaagcacttaaatctgctca 230
           |||||||| |||| |||||||||||||||
Sbjct: 202 ccctttggtgaagtacttaaatctgctca 230


>29726.m004086 sucrose synthase, putative
          Length = 2322

 Score = 52.0 bits (26), Expect = 1e-06
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 79  cttgtttctcttctctgcaggtatgtggatcaagggaaaggaattttgca 128
           |||||||||||||||  |||| |||||| | ||||||||||||| |||||
Sbjct: 61  cttgtttctcttctcaccaggcatgtggctgaagggaaaggaatattgca 110