Jatropha Genome Database

JcCB0334901.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0334901.20 - phase: 1 /partial
         (221 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29727.m000492 nucleolysin tia-1, putative                             311   9e-85

>29727.m000492 nucleolysin tia-1, putative
          Length = 1269

 Score =  311 bits (157), Expect = 9e-85
 Identities = 205/221 (92%)
 Strand = Plus / Plus

                                                                        
Query: 1    cagctgcacctttgccaggcctctctgctactgaccttctgacatatgagcggcaactag 60
            ||||||||||||||||||||||||| || ||||||||| ||||||| |||||||||||||
Sbjct: 1046 cagctgcacctttgccaggcctctcggccactgaccttttgacatacgagcggcaactag 1105

                                                                        
Query: 61   caatgggcaagatgggtggtgtccatgctttgatgcaccctcaggggcagcatgctctta 120
            ||||||| |||||||| ||||| ||||| || ||||||||||||||||||||| ||||||
Sbjct: 1106 caatggggaagatgggcggtgttcatgccttaatgcaccctcaggggcagcatcctctta 1165

                                                                        
Query: 121  aacaagcagcaatgggtatgggtgctgctggagcaagccaggcaatatatgatggtgggt 180
            |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1166 aacaagcagccatgggaatgggtgctgctggagcaagccaggcaatatatgatggtgggt 1225

                                                     
Query: 181  tccagagtgtagctgctgcccagcaactcatgtactaccag 221
            |||||| ||| |||||||| ||||| |||||||||||||||
Sbjct: 1226 tccagaatgttgctgctgctcagcagctcatgtactaccag 1266