Jatropha Genome Database

JcCB0333371.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0333371.10 + phase: 0 /short
         (147 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28176.m000270 acyl-CoA dehydrogenase, putative                         96   7e-20

>28176.m000270 acyl-CoA dehydrogenase, putative
          Length = 1323

 Score = 95.6 bits (48), Expect = 7e-20
 Identities = 75/84 (89%)
 Strand = Plus / Plus

                                                                       
Query: 42  aaagagttcttattttaacttgccaccgttagatgtttccgttgcatttcctcaagcaac 101
           |||||||||||||||||| || ||||| ||  |||| ||  ||||||| |||||||||||
Sbjct: 51  aaagagttcttattttaatttaccaccattgaatgtgtctattgcattccctcaagcaac 110

                                   
Query: 102 tccagcatccatatttcctccttg 125
           ||||||||||||||||||||||||
Sbjct: 111 tccagcatccatatttcctccttg 134