Jatropha Genome Database

JcCB0331671.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0331671.10 - phase: 0 /partial
         (282 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29776.m000488 isoamylase, putative                                    339   5e-93

>29776.m000488 isoamylase, putative
          Length = 2388

 Score =  339 bits (171), Expect = 5e-93
 Identities = 240/263 (91%)
 Strand = Plus / Plus

                                                                        
Query: 20   gttgtggaaacacattcaattgtaatcatcctatcgtgcgccaatttatattagactgtt 79
            ||||||| |||||||||||||| || |||||||| ||||||||||||||||| |||||  
Sbjct: 1163 gttgtgggaacacattcaattgcaaccatcctattgtgcgccaatttatattggactgcc 1222

                                                                        
Query: 80   taagatattgggtaatagaaatgcatgtggatggcttccgctttgatcttgcttctatca 139
            |||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 1223 taagatattgggtactggaaatgcatgtggatggcttccgctttgatcttgcatctatta 1282

                                                                        
Query: 140  tgaccaggggtagtagtctttgggatgcagttaatgtatttgggaatcccgtagagggcg 199
            |||| |||||||| ||||||||||| ||||| ||||| |||||||||||  ||||||| |
Sbjct: 1283 tgactaggggtagcagtctttgggacgcagtcaatgtttttgggaatccaatagagggtg 1342

                                                                        
Query: 200  acttgctgacgactggcacccctcttagcagtcctccattgattgacatgataagtaatg 259
            |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1343 acttgctgacaactggcacccctcttagcagccctccattgattgacatgataagtaatg 1402

                                   
Query: 260  atccaatacttcgtgaagtaaag 282
            |||||||||||| || |||||||
Sbjct: 1403 atccaatacttcatggagtaaag 1425