Jatropha Genome Database

JcCB0329751.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0329751.10 - phase: 0 /pseudo
         (490 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30026.m001452 wd40 protein, putative                                  426   e-119

>30026.m001452 wd40 protein, putative
          Length = 4377

 Score =  426 bits (215), Expect = e-119
 Identities = 363/411 (88%), Gaps = 1/411 (0%)
 Strand = Plus / Plus

                                                                        
Query: 45   ggtgggtctttatacaaatggtgaaccgtttgtggcttgccatgactgtaatttccctat 104
            |||||||||| || ||||||| || | |||||| ||||||||||||||||||||||| ||
Sbjct: 1493 ggtgggtcttaatgcaaatggagagctgtttgttgcttgccatgactgtaatttccccat 1552

                                                                        
Query: 105  gtgcaagtcttgttttgagtacgagatcaaggagaacaggaaagtatgcttgcggtgtgg 164
            |||||| |||||||||||||  ||||||||||||   ||||| | ||||||||| |||| 
Sbjct: 1553 gtgcaaatcttgttttgagtttgagatcaaggagggaaggaaggcatgcttgcgttgtgc 1612

                                                                        
Query: 165  ctctccttatgatgagaacttgttggatgatggtgaagcaaaggcatcaggcaatcgatc 224
            |||||||| |||||| |||||||||||| |||||||  |||||||| |  |||| | |||
Sbjct: 1613 ctctccttttgatgaaaacttgttggataatggtgatacaaaggcaactagcaaccaatc 1672

                                                                        
Query: 225  a-accatggcatctcaactaaacaattctcaggatgttggaattcatgcaagacatgtca 283
              || | | ||||||| || || ||| |||||||||||||||||||||||||||| ||||
Sbjct: 1673 ccacaacgacatctcacctcaataatcctcaggatgttggaattcatgcaagacacgtca 1732

                                                                        
Query: 284  gtagtgtgtcaacagtggatagtgaaatgaatgatgaatatgggaatccaatttggaaaa 343
            ||||||| ||||||||||||||||||||||||||||| | |||||||||||| |||||||
Sbjct: 1733 gtagtgtttcaacagtggatagtgaaatgaatgatgagtttgggaatccaatctggaaaa 1792

                                                                        
Query: 344  atcgagtggagagttggaaagataaaaagaacaagaagaaaaagaatgctccaaagcctg 403
            ||||||||||||||||||||||||||||| ||||||||||||| | |||||| |||||||
Sbjct: 1793 atcgagtggagagttggaaagataaaaagcacaagaagaaaaaaagtgctcctaagcctg 1852

                                                               
Query: 404  aaaaggagccagctgaaattccacctgagcagcagatggaggacaagccgt 454
            ||||||||||||||||||||||||| |||||||||||||| || |||||||
Sbjct: 1853 aaaaggagccagctgaaattccacccgagcagcagatggaagaaaagccgt 1903