Jatropha Genome Database
- JcCB0329631.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0329631.10 + phase: 2 /pseudo/partial
(748 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29762.m000495 Aspartate carbamoyltransferase 2, chloroplast prec... 440 e-123
>29762.m000495 Aspartate carbamoyltransferase 2, chloroplast
precursor, putative
Length = 1083
Score = 440 bits (222), Expect = e-123
Identities = 354/398 (88%)
Strand = Plus / Plus
Query: 347 cttgccaaatatcaagatgtgaagatttattttgtctctcctgaagtagtaaaaatgaag 406
||||||||||| || ||||| ||||| |||||||| |||||||| || ||||||||||||
Sbjct: 679 cttgccaaataccaggatgtaaagatctattttgtgtctcctgatgtggtaaaaatgaag 738
Query: 407 gacgatataaaagattatttaacatcgaagggagttacatgggaagaaagtgctgattta 466
|| ||||||||||| || || |||||| ||||||| |||||||||||||||||||||
Sbjct: 739 gatgatataaaagactacttggcatcgaggggagttgagtgggaagaaagtgctgattta 798
Query: 467 atagaagtagcttcaaagtgtgatgttgtgtatcaaactcgcattcagcgagaaaggttt 526
|| ||||| || ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 799 atggaagtggcgtcaaagtgtgatgttgtgtatcaaactcgaattcagcgagaaagattt 858
Query: 527 ggagagagaatagacctttatgaagaagctcgaggcaagtatatagtggatcgtgatgtg 586
||||||||||| |||||||| ||||||||||||||||| || || |||||| |||||||
Sbjct: 859 ggagagagaattgacctttacgaagaagctcgaggcaaatacattgtggattctgatgtg 918
Query: 587 ttaaatgtgatgcagaagcatgctgtagttatgcatcctcttccaaggctggatgagata 646
|||||||||||||||||||| ||||| || |||||||||||||| ||||| |||||||||
Sbjct: 919 ttaaatgtgatgcagaagcacgctgtggtcatgcatcctcttccgaggctagatgagata 978
Query: 647 actattgatgttgatgcggatccaagaggtgcttattttagacaagcaaagaatggtctc 706
||| | |||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 979 actgtggatgttgatgtcgatccaagagctgcttattttagacaagcaaagaatggtctc 1038
Query: 707 tacatcagaatggctcttttgaagcttttactcgttgg 744
|||||| ||||||| ||| |||| ||| |||| |||||
Sbjct: 1039 tacatccgaatggcgcttctgaaacttctacttgttgg 1076
Score = 367 bits (185), Expect = e-101
Identities = 306/345 (88%), Gaps = 1/345 (0%)
Strand = Plus / Plus
Query: 1 ttgcaagagaaatggaaaagattgagaaaaattctcttggggagtcaaatccttaaaggt 60
||||| |||||||||| |||||||| || ||||||| |||| |||||||| ||||| |||
Sbjct: 221 ttgcacgagaaatggagaagattgaaaagaattctcctggg-agtcaaattcttaagggt 279
Query: 61 tatctaatggctacccttttttatgagccatctactcgtactaggctttcttttgagtct 120
||| |||||||||||||||| ||||| || ||||| ||||||||||||||||||||||||
Sbjct: 280 tatttaatggctacccttttctatgaaccgtctacccgtactaggctttcttttgagtct 339
Query: 121 gctatgaaaaggttaggcggtgaggttttaactactgaaaacgcgagggagttttcatct 180
|| |||||| || | || ||||||||||| |||||||||||||| ||||| ||||| ||
Sbjct: 340 gcgatgaaacggcttggtggtgaggttttgactactgaaaacgcaagggaattttcttca 399
Query: 181 gctgccaagggagagacgcttgaagatactattagaactgttgaagggtattctgatatt 240
||||| ||||||||||| |||||||| || ||||||||||||||||| ||||| |||||
Sbjct: 400 gctgctaagggagagacacttgaagacaccattagaactgttgaaggttattcggatatc 459
Query: 241 attgttatgcgtcattttgagagtggtgctgcaagaagagctgcagctactgctagcatt 300
|||||||||||||||||||| ||||| ||||||||||||||||| ||||||| |||||
Sbjct: 460 attgttatgcgtcattttgaaagtggcgctgcaagaagagctgctactactgcctgcatt 519
Query: 301 cctattattaatgcaggtgatggtcctggacagcatccaactcag 345
||| ||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 520 cctgttattaatgcaggggatggtcctggacaacatccaactcag 564