Jatropha Genome Database

JcCB0320341.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0320341.10 + phase: 0 
         (234 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29830.m001444 transcription factor, putative                          214   2e-55

>29830.m001444 transcription factor, putative
          Length = 672

 Score =  214 bits (108), Expect = 2e-55
 Identities = 168/188 (89%)
 Strand = Plus / Plus

                                                                       
Query: 34  gaagaggcagaacggcaaaagcaagagaatgagaatgctgcaatggctgtggcgaagagg 93
           |||||||||||||| ||||||||||| |||||| ||||||| ||||||||||| ||||||
Sbjct: 475 gaagaggcagaacgacaaaagcaagaaaatgaggatgctgctatggctgtggcaaagagg 534

                                                                       
Query: 94  caaaagatgttggagaaggaaaaagaaactatagagaggaaacccttcattgaaatacaa 153
           ||||  |||||||||| |||||| |||||||||||||||||||| ||||| || ||||||
Sbjct: 535 caaagaatgttggagagggaaaaggaaactatagagaggaaaccattcatggagatacaa 594

                                                                       
Query: 154 agtgagaccaagagattcaggcaagatgttttcaagagaaggcaccgagcaagagctctt 213
           || ||||| ||||||||| |||||||||||||||||||||||||  |||| ||||| |||
Sbjct: 595 agcgagacgaagagattccggcaagatgttttcaagagaaggcatagagctagagcactt 654

                   
Query: 214 agaaacca 221
           | ||||||
Sbjct: 655 aaaaacca 662