Jatropha Genome Database
- JcCB0320291.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0320291.10 - phase: 0 /partial
(780 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29696.m000106 actin binding protein, putative 436 e-122
29848.m004543 DNA binding protein, putative 123 2e-27
>29696.m000106 actin binding protein, putative
Length = 3576
Score = 436 bits (220), Expect = e-122
Identities = 565/680 (83%)
Strand = Plus / Plus
Query: 7 ttgtttcgtaaattgttctataggaagccaccagatggtctgctcgagatctgcgagcgt 66
|||||||| ||||||||||| ||||| ||||| |||||| ||||||||||||| ||||||
Sbjct: 7 ttgtttcgaaaattgttctacaggaaaccacctgatggtttgctcgagatctgtgagcgt 66
Query: 67 gtttacgtcttcgattactgttttaccgtcgatgcttggcaagaagagaattatacgagc 126
|| ||||| || ||| |||| |||||| |||||||||||||||||||||||||| ||
Sbjct: 67 gtatacgtgtttgatcactgctttaccaccgatgcttggcaagaagagaattataagaaa 126
Query: 127 tatatgagtggaatagttggtcaacttaaagagcacttccctgatgcttcgttcttggtg 186
|||||||||||||||||||||||||||||| | || || ||||||||||| ||||||| |
Sbjct: 127 tatatgagtggaatagttggtcaacttaaacaacattttcctgatgcttcattcttggcg 186
Query: 187 ttcaatttccgtgagggagagaaacaaagtcagctgtctgacattatgtctgaatataat 246
|| || ||||| ||||| |||| || ||| ||||| || | | |||| |||| | ||
Sbjct: 187 tttaacttccgcgagggtgagacaccaagccagcttgctcatctcctgtccgaatttgat 246
Query: 247 atgactatcatggagtaccctcggcaatatgaaggttgcccattgctcagaatggaggtg 306
||||| || ||||| |||||||||||||||||||||||||| ||||| | ||||||||||
Sbjct: 247 atgaccattatggaataccctcggcaatatgaaggttgcccgttgcttaaaatggaggtg 306
Query: 307 atccatcattttctaagatcgggtgaaagttggctttcacttggcgtacaaaatttgctt 366
|| |||||||| ||||||| || |||||||||||||| ||||| ||| ||| | ||
Sbjct: 307 attcatcatttcttaagatcaggcgaaagttggctttcgcttgggcaacataatcttctc 366
Query: 367 ctaatgcactgtgaacggggtggttggcctgttttggctttcatgctggctgcactattg 426
|| ||||| |||||| | || |||||||||||| | ||||| ||||||| || || |
Sbjct: 367 cttatgcattgtgaaagaggcggttggcctgttcttgcttttgtgctggcgtcattactt 426
Query: 427 ctttacagaaagcaattcagtggagagcataagactctcgacatgatttacagacaggct 486
|||| | ||||| | ||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 427 atttatacgaagcagtatagtggagagcagaagactctcgacatgatatatagacaggct 486
Query: 487 cctcgtgagcttttgcagttgcttcaaccgctgaatcccatcccttctcaactcaggtat 546
|||||||||||| |||| || || ||| ||||||| ||||||||||| | ||||||
Sbjct: 487 cctcgtgagcttgtgcactttctgtcaccattgaatcctgtcccttctcaattgaggtat 546
Query: 547 ctacaatatgtttcaaggaggaatgtggcttcagagtggcctccattggagagagctctt 606
|||||||||||||||||||||| ||||||||||| ||||||||| |||| ||| |||||
Sbjct: 547 ttacaatatgtttcaaggaggaacgtggcttcagaatggcctccactggatagaactctt 606
Query: 607 acattggagtgcattattctaagatttattcctgatttcgatggagaagggggctgccgt 666
| |||||| || ||||| | |||||||||||| |||| |||||| | ||||| ||||||
Sbjct: 607 aaattggattgtgttattttgagatttattcctaattttgatggatacgggggttgccgt 666
Query: 667 cctgtatttcgaatatatgg 686
|| || || ||||| |||||
Sbjct: 667 ccggtgttccgaatttatgg 686
>29848.m004543 DNA binding protein, putative
Length = 3801
Score = 123 bits (62), Expect = 2e-27
Identities = 341/434 (78%)
Strand = Plus / Plus
Query: 235 tctgaatataatatgactatcatggagtaccctcggcaatatgaaggttgcccattgctc 294
||||| ||| |||||||| | ||||| || ||||| || |||||||||||||| ||||||
Sbjct: 235 tctgagtatgatatgactgtaatggactatcctcgccactatgaaggttgccctttgctc 294
Query: 295 agaatggaggtgatccatcattttctaagatcgggtgaaagttggctttcacttggcgta 354
| ||||||| ||||||| || ||||| ||||| |||| || ||||| |||||| |
Sbjct: 295 acaatggagatgatccaccactttctcagatcaagtgagagctggctgtcacttctgaaa 354
Query: 355 caaaatttgcttctaatgcactgtgaacggggtggttggcctgttttggctttcatgctg 414
|||||| | || | ||||| |||||||| ||||| ||||| |||||||| ||||||||
Sbjct: 355 caaaatgtactcttgatgcattgtgaacgaggtggatggccagttttggcattcatgctt 414
Query: 415 gctgcactattgctttacagaaagcaattcagtggagagcataagactctcgacatgatt 474
||| | || ||| | || || ||||| |||||||| ||||| || || | |||||||||
Sbjct: 415 gcttctctcttgatatataggaagcagttcagtggggagcagaaaacattagacatgatt 474
Query: 475 tacagacaggctcctcgtgagcttttgcagttgcttcaaccgctgaatcccatcccttct 534
|||| ||| || || || |||||||||||| || | ||| || ||||| | |||||
Sbjct: 475 tacaaacaagcaccacgagagcttttgcagctgatgtcacccctcaatccgttgccttcc 534
Query: 535 caactcaggtatctacaatatgtttcaaggaggaatgtggcttcagagtggcctccattg 594
||| | ||||| | || ||||| ||||| |||||||||| ||| ||||||||||| ||
Sbjct: 535 caattgaggtacttgcagtatgtatcaagaaggaatgtgggctcacagtggcctccactg 594
Query: 595 gagagagctcttacattggagtgcattattctaagatttattcctgatttcgatggagaa 654
|| || || |||||| |||| || ||||||| ||| ||||||| || | ||||||||
Sbjct: 595 gatagggcacttacactggactgtgttattcttagagttattcccaatatggatggagag 654
Query: 655 gggggctgccgtcc 668
|| || ||||||||
Sbjct: 655 ggaggttgccgtcc 668