Jatropha Genome Database

JcCB0319311.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0319311.20 + phase: 0 
         (183 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29830.m001422 DNA-damage-inducible protein f, putative                214   1e-55

>29830.m001422 DNA-damage-inducible protein f, putative
          Length = 1344

 Score =  214 bits (108), Expect = 1e-55
 Identities = 166/184 (90%), Gaps = 1/184 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtatttggggtcgggaatatttctcaacatgatgggcatatcatctgcttcacccatg 60
           ||||||||||| || ||| |||||||||| |||||||||||||||||||||||||| |||
Sbjct: 340 atgtatttgggatctggagtatttctcaatatgatgggcatatcatctgcttcacctatg 399

                                                                       
Query: 61  cggattccagccgaaagatttctcaaactaagagcaatcggtgctcccgcagttgtcctt 120
           ||  ||||||| |||| |||||||||| | |||||||| |||||||| ||||||||||||
Sbjct: 400 cgcgttccagcagaaaaatttctcaaaattagagcaattggtgctcctgcagttgtcctt 459

                                                                       
Query: 121 tatcttgccattcagggtatattccg-gggtttaaggatacaaggactcctgtcctatgt 179
           ||||| ||||||||||| |||||||| |||||||| ||||||| ||||||||||||||||
Sbjct: 460 tatctggccattcagggcatattccgtgggtttaaagatacaaagactcctgtcctatgt 519

               
Query: 180 ctag 183
           ||||
Sbjct: 520 ctag 523