Jatropha Genome Database
- JcCB0318551.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0318551.10 - phase: 0 /partial
(699 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30008.m000797 3-isopropylmalate dehydratase, putative 720 0.0
30008.m000798 3-isopropylmalate dehydratase, putative 468 e-131
>30008.m000797 3-isopropylmalate dehydratase, putative
Length = 1533
Score = 720 bits (363), Expect = 0.0
Identities = 572/641 (89%), Gaps = 3/641 (0%)
Strand = Plus / Plus
Query: 50 agaaggatctaggtcgctctgctttttcttcaccgtcatcgccatttt---ctattccca 106
|||||||||| |||| ||||||||| ||||||| |||||||||||||| |||||||||
Sbjct: 47 agaaggatctgggtctctctgctttctcttcacagtcatcgccattttattctattccca 106
Query: 107 aatgccggaaatcaatctccaagaaaattgtatcagtcatggctcctcagcaatcagaac 166
||||| ||||||||| ||||||||| |||||||||| |||||||| ||||| |||||||
Sbjct: 107 aatgcaagaaatcaatttccaagaaagttgtatcagttatggctccgcagcagtcagaac 166
Query: 167 gcaggcctgccaccacgggctcagtgaagactgcaatgacgatgacagaaaaaatattgg 226
||| ||||||||| || ||||| ||||||||||||||||| |||||||| ||||| ||||
Sbjct: 167 gcacgcctgccactactggctctgtgaagactgcaatgacaatgacagagaaaatcttgg 226
Query: 227 ccaaggcatctgagaagcctcagttaagtccaggtgagaatgtttgggtcaacgttgatg 286
| | ||| || ||||| | ||||| || || ||||||||||||||||| ||||||||||
Sbjct: 227 ctagggcctccgagaaatcccagttgagccctggtgagaatgtttgggttaacgttgatg 286
Query: 287 tcctgatgactcatgatgtttgtggccctggttctattggtatcttcaagaaagagtttg 346
| ||||||||||||||||||||||||||||||| ||||| |||||||||| |||||| |
Sbjct: 287 ttttgatgactcatgatgtttgtggccctggttccattgggatcttcaagagagagttcg 346
Query: 347 gagctaatgctaaggtatgggaccgcgagaaaattgtcattataccagatcattacatat 406
|| ||||| | ||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 347 gacagaatgccacggtttgggaccgcgagaaaattgtcattataccggatcattacatat 406
Query: 407 tcactgctgatgaacgtgcaaaccggaatgtagacatattgagggacttctgctatgagc 466
||||| ||||||||||||||||||| ||||| || || |||||||| |||||| | ||||
Sbjct: 407 tcactactgatgaacgtgcaaaccgtaatgtggatatcttgagggatttctgccaggagc 466
Query: 467 aaaacataaagtacttctatgacatcaaggaccttagtaactttaaggctaaccctgatt 526
||||| | ||||| |||||||| |||||||| |||||||||||||||| |||||||||||
Sbjct: 467 aaaacgttaagtatttctatgatatcaaggatcttagtaactttaaggttaaccctgatt 526
Query: 527 ataaaggtgtatgccatgttgcacttgctcaagaaggtcattgcaggccaggagaggtcc 586
|||||||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||
Sbjct: 527 ataaaggtgtatgccacgttgcacttgcccaagaaggccattgtaggccaggagaggtcc 586
Query: 587 ttttaggtactgactctcacacctgcactgctggagcatttggccaatttgctactggaa 646
| |||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 587 tattaggtacagactcccacacctgcactgctggagcatttgggcaatttgctactggaa 646
Query: 647 ttggcaatactgatgcgggttttgttttaggcactgggaag 687
|||||||||||||||| |||||||| |||||||||||||||
Sbjct: 647 ttggcaatactgatgcaggttttgtattaggcactgggaag 687
>30008.m000798 3-isopropylmalate dehydratase, putative
Length = 1866
Score = 468 bits (236), Expect = e-131
Identities = 508/598 (84%), Gaps = 3/598 (0%)
Strand = Plus / Plus
Query: 105 caaatgccggaaatcaatctccaagaaaattgtatcagtcatggctcctcagcaatcaga 164
||||||| ||||||||| | ||| | ||| ||| ||||| || | ||||||||||||||
Sbjct: 513 caaatgcaagaaatcaattttcaaaagaatagtagcagtcgtgtcccctcagcaatcaga 572
Query: 165 acgcaggcctgccaccacgggctcagt---gaagactgcaatgacgatgacagaaaaaat 221
|||| |||||||||||| ||||| || ||||| ||||||||| | |||||| |||||
Sbjct: 573 gcgcaagcctgccaccactggctctgttgtgaagaatgcaatgacaacgacagagaaaat 632
Query: 222 attggccaaggcatctgagaagcctcagttaagtccaggtgagaatgtttgggtcaacgt 281
||||||| ||||||||||||||||||||| | |||||||||||||||||||| |||||
Sbjct: 633 cttggccagggcatctgagaagcctcagttgggcccaggtgagaatgtttgggtaaacgt 692
Query: 282 tgatgtcctgatgactcatgatgtttgtggccctggttctattggtatcttcaagaaaga 341
|||| || ||||||| ||||||||||||||||| |||||| ||| || ||||||| |||
Sbjct: 693 tgatatcttgatgacccatgatgtttgtggcccaggttcttttgcaatattcaagagaga 752
Query: 342 gtttggagctaatgctaaggtatgggaccgcgagaaaattgtcattataccagatcatta 401
|||||||| ||||||||||| ||||||| |||||| |||| | ||||||||||||||
Sbjct: 753 gtttggagagaatgctaaggtttgggaccatgagaaagttgtggtcataccagatcatta 812
Query: 402 catattcactgctgatgaacgtgcaaaccggaatgtagacatattgagggacttctgcta 461
|||||||| |||||| ||| ||| ||||| ||||| || ||||||||||| ||||||
Sbjct: 813 tatattcacagctgataaacttgctaaccgaaatgtggatatattgagggaattctgcct 872
Query: 462 tgagcaaaacataaagtacttctatgacatcaaggaccttagtaactttaaggctaaccc 521
|| ||||| |||||| |||||||||| |||||||| |||||||||| |||||||| |
Sbjct: 873 ggaacaaaatataaagcacttctatgatatcaaggatattagtaacttcaaggctaattc 932
Query: 522 tgattataaaggtgtatgccatgttgcacttgctcaagaaggtcattgcaggccaggaga 581
||||| ||||| ||||||||| ||||||| || ||||||||||| || |||||||||||
Sbjct: 933 agattacaaaggggtatgccatattgcactcgcccaagaaggtcactgtaggccaggaga 992
Query: 582 ggtccttttaggtactgactctcacacctgcactgctggagcatttggccaatttgctac 641
||| || ||||| || || |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 993 ggttctgttagggacagattctcacacatgcactgctggagcatttggccaatttgctac 1052
Query: 642 tggaattggcaatactgatgcgggttttgttttaggcactgggaagttgctgctcaag 699
||||||||| | |||||||| ||||||||||| ||||| || ||| | |||||||||
Sbjct: 1053 tggaattggtatcactgatgcaggttttgttttgggcacaggaaagctcctgctcaag 1110