Jatropha Genome Database
- JcCB0314431.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0314431.10 + phase: 0 /partial
(1554 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30169.m006314 Casbene synthase, chloroplast precursor, putative 101 1e-20
29910.m000944 Terpinolene synthase, chloroplast precursor, putative 74 3e-12
30065.m001152 Casbene synthase, chloroplast precursor, putative 72 1e-11
29827.m002614 Casbene synthase, chloroplast precursor, putative 58 2e-07
30065.m001155 casbene synthase, putative 58 2e-07
>30169.m006314 Casbene synthase, chloroplast precursor, putative
Length = 1668
Score = 101 bits (51), Expect = 1e-20
Identities = 135/163 (82%)
Strand = Plus / Plus
Query: 242 ttttaagacaacatggatacaaaatgtcgtgcgatgtgttcaacaaattcaaagacaagg 301
||||||||||| ||||| ||||| || | ||||||||||| || |||||||| ||| |
Sbjct: 338 ttttaagacaatatggacacaaagtgccttgcgatgtgtttaataaattcaagaacagtg 397
Query: 302 atggaaaattcaagaaagctataagtaatgatgtgaagggcattcttagcttatatgaag 361
||||||| ||||||||| || ||||| |||| ||| ||||||||||||| ||||
Sbjct: 398 atggaaagttcaagaaaagcattgccaatgacctgaaaggccttcttagcttatacgaag 457
Query: 362 caagttttgtaagtgtgcacggagaagatattctagatgaagc 404
| |||||| |||||||||| |||||| ||||||||||||||||
Sbjct: 458 cgagttttctaagtgtgcatggagaaaatattctagatgaagc 500
Score = 87.7 bits (44), Expect = 2e-16
Identities = 101/120 (84%)
Strand = Plus / Plus
Query: 519 aagagttgaggccaggcaatacatctctttttacgaagaagatgagtctcgaaatgaaac 578
|||||| ||||| ||||||||||| ||| || ||||||||||||||||| ||||||||
Sbjct: 609 aagagtggaggctaggcaatacataagtttctatgaagaagatgagtctcgcaatgaaac 668
Query: 579 cctacttgagtttgctaaattagattttaatcgagtacaattactacacaagcaagagct 638
|| ||| ||||||| || || ||||||||||| |||| ||| | ||||||||||||||
Sbjct: 669 tcttcttaagtttgcaaagttggattttaatcggttacagttattgcacaagcaagagct 728
Score = 85.7 bits (43), Expect = 7e-16
Identities = 121/147 (82%)
Strand = Plus / Plus
Query: 1253 cccataaggatgagcaaaagaggggagactgtgcttcaagtgtagagtgttacacaaaag 1312
||||| |||||||||||||||||||| | |||||||||||| |||| || |||| ||||
Sbjct: 1367 cccatgaggatgagcaaaagaggggacattgtgcttcaagtatagaatgctacatgaaag 1426
Query: 1313 aatatggtgttacagaagaaaaagcagttgaagaaatcttgaaaatatgtggaaatgcat 1372
|||||||||| | ||| | ||||| | ||||| || |||||||||| ||||||||
Sbjct: 1427 aatatggtgtgtccgaaaagaaagccatagaagagattcaaaaaatatgtgcaaatgcat 1486
Query: 1373 ggaaagatattaacgaagaatgcatga 1399
||||||| || ||||| || |||||||
Sbjct: 1487 ggaaagacatgaacgaggagtgcatga 1513
Score = 60.0 bits (30), Expect = 4e-08
Identities = 90/110 (81%)
Strand = Plus / Plus
Query: 807 agatgacacatacgatgcatatgcttcaatggaagaaatcaatgcttttacagatgcatt 866
|||||| |||||||||||||||| | || | || ||| || | ||||||| |||||||
Sbjct: 924 agatgatacatacgatgcatatggtacacttgatgaactccaacgttttacaaatgcatt 983
Query: 867 tgagaggtgcaatattggtgccattgatcaactgccagattacatgaaag 916
| | |||||| | |||| ||| |||||| |||| ||||||||||||||||
Sbjct: 984 tcaaaggtgcgacattgatgctattgatgaactaccagattacatgaaag 1033
>29910.m000944 Terpinolene synthase, chloroplast precursor, putative
Length = 1431
Score = 73.8 bits (37), Expect = 3e-12
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 346 cttagcttatatgaagcaagttttgtaagtgtgcacggagaagatattctagatgaagct 405
||||||||||| ||||| | ||| |||||||||| |||||||||||| ||||||||||
Sbjct: 352 cttagcttatacgaagccacctttctaagtgtgcatggagaagatattttagatgaagca 411
Query: 406 cttgctttcacaa 418
|||||||| ||||
Sbjct: 412 cttgcttttacaa 424
>30065.m001152 Casbene synthase, chloroplast precursor, putative
Length = 849
Score = 71.9 bits (36), Expect = 1e-11
Identities = 105/128 (82%)
Strand = Plus / Plus
Query: 1252 tcccataaggatgagcaaaagaggggagactgtgcttcaagtgtagagtgttacacaaaa 1311
|||||| |||||||||||||||||||| | |||||||| | ||||||| || | ||
Sbjct: 547 tcccatgaggatgagcaaaagaggggacattgtgcttcggctatagagtgctatatgaac 606
Query: 1312 gaatatggtgttacagaagaaaaagcagttgaagaaatcttgaaaatatgtggaaatgca 1371
||||||||||| ||||| | ||||| ||||||| || ||||||||||||| |||||
Sbjct: 607 caatatggtgtttcagaaaagaaagccattgaagagattcagaaaatatgtggatatgca 666
Query: 1372 tggaaaga 1379
||||||||
Sbjct: 667 tggaaaga 674
>29827.m002614 Casbene synthase, chloroplast precursor, putative
Length = 1656
Score = 58.0 bits (29), Expect = 2e-07
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 1259 aggatgagcaaaagaggggagactgtgcttcaagtgtagagtgttacacaaaagaatatg 1318
|||| |||||||||||||||||||| |||||||||| ||||| |||| || |||||||
Sbjct: 1364 aggaagagcaaaagaggggagactgcccttcaagtgtggagtgctacatgaatgaatatg 1423
Query: 1319 g 1319
|
Sbjct: 1424 g 1424
>30065.m001155 casbene synthase, putative
Length = 471
Score = 58.0 bits (29), Expect = 2e-07
Identities = 92/113 (81%)
Strand = Plus / Plus
Query: 526 gaggccaggcaatacatctctttttacgaagaagatgagtctcgaaatgaaaccctactt 585
||||| ||||||||||||| ||| || | ||||||||||| | |||||||| || |||
Sbjct: 148 gaggctaggcaatacatctgtttctatagaaaagatgagtcttgcaatgaaactctcctt 207
Query: 586 gagtttgctaaattagattttaatcgagtacaattactacacaagcaagagct 638
||||||| || || ||||||||||| |||||||| | |||| ||||||||
Sbjct: 208 aagtttgcaaagttggattttaatcggttacaattattgtacaaacaagagct 260