Jatropha Genome Database

JcCB0309941.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0309941.10 + phase: 0 
         (456 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30169.m006297 phosphoglycerate kinase, putative                       214   3e-55

>30169.m006297 phosphoglycerate kinase, putative
          Length = 1440

 Score =  214 bits (108), Expect = 3e-55
 Identities = 234/276 (84%)
 Strand = Plus / Plus

                                                                       
Query: 164 ctgctgacccccttttttctcaccatgtggcatcaaaaatcagatcatttgggttcggta 223
           ||||||||||   |||||||||||| || |||||||||||| | || ||||| |  || |
Sbjct: 140 ctgctgaccctgctttttctcaccacgttgcatcaaaaatccgttcttttggttctggca 199

                                                                       
Query: 224 aggcgtcgagggcagtggtttccatggcaaagaagagtgtaggggatttgacgggagcgg 283
           ||||||| ||||| || || |||||||| |||||||| || || ||| |||| |  || |
Sbjct: 200 aggcgtccagggctgttgtctccatggctaagaagagcgttggtgatctgactgctgctg 259

                                                                       
Query: 284 atttgaaaggaaagagagtttttgtgagggctgatttgaatgtgcctttggatgacaacc 343
           |||| ||||| ||||  |||||||| ||||||||||||||||| ||||||||||| ||||
Sbjct: 260 atttaaaagggaagaaggtttttgtaagggctgatttgaatgttcctttggatgataacc 319

                                                                       
Query: 344 agaacatcactgatgacactagaattagagctgcaatccccacgattaagcatttgattc 403
           |||| || |||||||| ||||||||||||||||| ||||| ||  |||||||||||||||
Sbjct: 320 agaaaattactgatgatactagaattagagctgctatccctactgttaagcatttgattc 379

                                               
Query: 404 agaatggtgctaaagtcattctttctactcatttgg 439
           ||||||| ||||||||||||||||| | ||||||||
Sbjct: 380 agaatggggctaaagtcattctttccagtcatttgg 415



 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                
Query: 1  atggcctctgctacggcgcccactaccctttcccttctcaaaaccgctgcttct 54
          |||||||||||||| || |||||||||||||| |||||||| ||  ||||||||
Sbjct: 1  atggcctctgctacagcacccactaccctttctcttctcaagactactgcttct 54