Jatropha Genome Database
- JcCB0309871.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0309871.10 + phase: 0 /pseudo
(1347 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30055.m001532 oxidoreductase, acting on the CH-CH group of donor... 94 3e-18
29791.m000526 oxidoreductase, acting on the CH-CH group of donor... 90 4e-17
29791.m000527 Male sterility protein, putative 86 6e-16
30055.m001531 Male sterility protein, putative 82 1e-14
>30055.m001532 oxidoreductase, acting on the CH-CH group of donors,
putative
Length = 1245
Score = 93.7 bits (47), Expect = 3e-18
Identities = 132/160 (82%), Gaps = 4/160 (2%)
Strand = Plus / Plus
Query: 690 ctatggatggccaaacacatatatatgtatttaccaaggcaatgggagaaatgattgtag 749
|||||||||||||||||||||| || ||||| |||||||||||||| ||||||||||
Sbjct: 459 ctatggatggccaaacacatat----gtctttacaaaggcaatgggagagatgattgtag 514
Query: 750 gacatttgaaggacaatctgccaatagtgatcgtacgtccaaccatggttactagtactt 809
||||||||||||| ||| || | |||| || |||| || ||||| | || |||||||
Sbjct: 515 gacatttgaaggagaatttgtccgtagtcattttacgacccaccattataacaagtactt 574
Query: 810 ggagagaaacttttcctggttggattgaaggtgtaagaac 849
| |||| |||||||||||||| ||||||| || |||||
Sbjct: 575 acaaagaaccttttcctggttgggttgaaggggtcagaac 614
Score = 69.9 bits (35), Expect = 4e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 88 gagaagctattaagggtacaaccaaatgtgaagaagctttatcttcttttaagagctgca 147
|||||| |||| || || |||||||||||||||||| | |||||||||||||||||| ||
Sbjct: 88 gagaagatattgagagtgcaaccaaatgtgaagaagttgtatcttcttttaagagctcca 147
Query: 148 gat 150
|||
Sbjct: 148 gat 150
>29791.m000526 oxidoreductase, acting on the CH-CH group of donors,
putative
Length = 561
Score = 89.7 bits (45), Expect = 4e-17
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 106 caaccaaatgtgaagaagctttatcttcttttaagagctgcagat 150
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 caaccaaatgtgaagaagctttatcttcttttaagagctgcagat 150
>29791.m000527 Male sterility protein, putative
Length = 1482
Score = 85.7 bits (43), Expect = 6e-16
Identities = 91/107 (85%)
Strand = Plus / Plus
Query: 44 ttttagtcactggggcaaccggatttcttgcaaaagtgttcttggagaagctattaaggg 103
|||| |||||||| ||||| |||| ||| ||||| || || |||||||| || | || |
Sbjct: 44 ttttggtcactggtgcaactggatatctagcaaaggtttttgtggagaaggtactgagag 103
Query: 104 tacaaccaaatgtgaagaagctttatcttcttttaagagctgcagat 150
| ||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 104 ttcaaccaaatgtgaagaagctttaccttcttttaagagccgcagat 150
Score = 69.9 bits (35), Expect = 4e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 353 ttaattttgcagccaccaccagatttgatgagagatatgatgttgcacttggtaccaata 412
|||||||||| ||||| |||| |||||||| ||||||||||||||||| || | |||||
Sbjct: 353 ttaattttgctgccacaaccaactttgatgaaagatatgatgttgcactaggaatcaata 412
Query: 413 cattgggagct 423
|| ||||||||
Sbjct: 413 cactgggagct 423
>30055.m001531 Male sterility protein, putative
Length = 1482
Score = 81.8 bits (41), Expect = 1e-14
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 106 caaccaaatgtgaagaagctttatcttcttttaagagctgcagat 150
|||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 106 caaccaaatgtgaagaagctttatcttcttctaagagctgcagat 150
Score = 56.0 bits (28), Expect = 6e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 783 tacgtccaaccatggttactagtacttggagagaaacttttcctggttggattgaaggtg 842
|||| ||||||||| | || ||||||| |||||| | ||||||||||||||||||||||
Sbjct: 779 tacggccaaccatgataacaagtacttatagagaaccatttcctggttggattgaaggtg 838