Jatropha Genome Database

JcCB0305141.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0305141.10 - phase: 0 /partial
         (152 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30143.m001221 conserved hypothetical protein                           90   4e-18

>30143.m001221 conserved hypothetical protein
          Length = 621

 Score = 89.7 bits (45), Expect = 4e-18
 Identities = 111/133 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaccaccagcatccacatcaccgccctagacggtattatcaacgtcaactccctcttc 60
           ||||| ||||||||||||||||||||  ||||||| ||  | || ||||| ||||| |||
Sbjct: 1   atgacgaccagcatccacatcaccgcattagacggaatagtgaatgtcaattccctattc 60

                                                                       
Query: 61  actctcgccgtcttcctcggtctcgcctggaacccatcggaccccaacaactccctcatt 120
           || ||||||||||| ||||| ||  ||||||||||||| ||||| || | |||| |||| 
Sbjct: 61  acactcgccgtctttctcggcctaacctggaacccatccgacccaaatagctccttcatc 120

                        
Query: 121 accgaccctacct 133
           |||||||| ||||
Sbjct: 121 accgaccccacct 133