Jatropha Genome Database

JcCB0304081.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0304081.10 + phase: 0 
         (408 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m014482 Protein yrdA, putative                                  226   8e-59

>30147.m014482 Protein yrdA, putative
          Length = 762

 Score =  226 bits (114), Expect = 8e-59
 Identities = 225/262 (85%)
 Strand = Plus / Plus

                                                                       
Query: 98  caaccaaatcgattactccgtcgccggatcgagtgaagtgggactatcgaggtcagaggc 157
           ||||||||||||| || |||||  ||||||| ||||||||||| ||||||||||||||||
Sbjct: 113 caaccaaatcgataacgccgtcagcggatcgcgtgaagtgggattatcgaggtcagaggc 172

                                                                       
Query: 158 agataatcccgttgggccagtggctcccgaaggtagccgttgatgcttatgttgcaccaa 217
           |||| || |||||||| |||||||||||||||||||| || ||||| || || ||||| |
Sbjct: 173 agattataccgttgggacagtggctcccgaaggtagctgtggatgcctacgtggcaccta 232

                                                                       
Query: 218 atgttgttctagcgggtcaagtcaccgtatgcgatggagcttcagtttggagcggatcgg 277
           |||| || ||||| || || ||||| || || |||||||||||||| |||||||||||||
Sbjct: 233 atgtagtcctagctggacaggtcacggtttgggatggagcttcagtctggagcggatcgg 292

                                                                       
Query: 278 tcctgcgaggcgatctcaacaagatcaccgtcggattctgctccaatgtgcaagagaggt 337
           | || || |||||||| ||||||||||| || || || ||||| ||||| |||||| |||
Sbjct: 293 tactacgtggcgatcttaacaagatcactgttggcttttgctctaatgttcaagagcggt 352

                                 
Query: 338 gcgtcgttcatgctgcttggaa 359
           |||| ||||||||||| |||||
Sbjct: 353 gcgttgttcatgctgcctggaa 374