Jatropha Genome Database

JcCB0303641.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0303641.10 - phase: 0 /partial
         (448 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30064.m000484 r2r3-myb transcription factor, putative                 210   5e-54

>30064.m000484 r2r3-myb transcription factor, putative
          Length = 426

 Score =  210 bits (106), Expect = 5e-54
 Identities = 217/254 (85%)
 Strand = Plus / Plus

                                                                       
Query: 177 tttaaagaaagggccgtggacggcggaggaggatgcgatactggtggattatgtgaggaa 236
           ||||||||| ||||||||||| || ||||||||||| ||| |||| || |||||||| ||
Sbjct: 162 tttaaagaaggggccgtggactgctgaggaggatgctatattggtagaatatgtgagaaa 221

                                                                       
Query: 237 acatggtgaaggaaattggaatgcggtgcagagacattctgggttgtctcgttgtggaaa 296
           |||||||||||| ||||||||||| ||||| || ||||| || ||| |||||||||||||
Sbjct: 222 acatggtgaagggaattggaatgcagtgcaaaggcattcaggattggctcgttgtggaaa 281

                                                                       
Query: 297 aagttgcagacttcggtgggctaatcacctccggcctaatcttaaaaaaggcgcattctc 356
            ||||| || ||||| |||||||| ||  |  | |||||||||||||| || || |||||
Sbjct: 282 gagttgtaggcttcgttgggctaaccatttaagacctaatcttaaaaagggtgccttctc 341

                                                                       
Query: 357 gccggaagaggagaggcttattgttgagttgcacgctaaatttggcaacaaatgggctcg 416
            || ||||| ||||| || ||||||||| | || ||||| ||||||||||||||||||||
Sbjct: 342 tcctgaagaagagagactcattgttgagctacatgctaagtttggcaacaaatgggctcg 401

                         
Query: 417 catggctagtctgc 430
           ||||||||||||||
Sbjct: 402 catggctagtctgc 415