Jatropha Genome Database

JcCB0302351.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0302351.10 - phase: 1 /partial
         (455 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30138.m003913 Transcription factor BIM1, putative                     337   3e-92

>30138.m003913 Transcription factor BIM1, putative
          Length = 1704

 Score =  337 bits (170), Expect = 3e-92
 Identities = 383/454 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1    tgcagccaaacttcttcaattctggtagaagtggtggcatagtcaatcaacttccaccta 60
            ||||||||||||||||||| | ||| |||| ||||||   |||   ||||||||||||||
Sbjct: 1247 tgcagccaaacttcttcaactgtggcagaaatggtggtgcagtggctcaacttccaccta 1306

                                                                        
Query: 61   gaatggtatcagatgctgaaaacattgcaaatcaacctcagccccaatcacataatacca 120
            || |||||||||||| ||| ||||  |||  ||||||| || |||||||| || | || |
Sbjct: 1307 gactggtatcagatgttgagaacacggcatctcaacctgagtcccaatcaaatcaaacta 1366

                                                                        
Query: 121  gattgtgtacaagtgatggagctgttgctgctgataagctgaaagaacaggagcttagca 180
            |||  ||||| | ||| || ||||| |||| ||||||||||||||||||| |||| ||||
Sbjct: 1367 gatcatgtaccactgagggtgctgtagctgttgataagctgaaagaacagcagctgagca 1426

                                                                        
Query: 181  ttgaaggtggtacaattaacatctcaagcgtgtactctcaagggttgctaaatactctga 240
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1427 ttgaaggtggtacaattaacatctcaagtgtgtactctcaagggttgctaaatactctga 1486

                                                                        
Query: 241  cacaagcactgcagagttctggagtagatttgtcactggccagcatctcagtgcaaattc 300
            ||||||| ||||||||||| ||||||||||| |||| ||||||||||||||| |||||  
Sbjct: 1487 cacaagccctgcagagttcaggagtagatttatcacaggccagcatctcagttcaaatcg 1546

                                                                        
Query: 301  agctaggaaagcgagccaatagaagaccaattcttccgacatccattgttaaggataacg 360
            | || || || ||||| ||||||  | |||   ||||||||||||||  ||||||||| |
Sbjct: 1547 atctggggaaacgagcaaatagacaatcaaacattccgacatccattaataaggataatg 1606

                                                                        
Query: 361  aggtcccctgtagcaatcaagggacaacacggccaagagtctcagatggagaagaatccg 420
            |||| || | | | |||||||| |||| |||||||||||| |||  |||||| ||||| |
Sbjct: 1607 aggttccttcttgtaatcaaggaacaatacggccaagagtatcaagtggagaggaatctg 1666

                                              
Query: 421  gtcaggccttaaagaagctcaagacaagtaaaag 454
             ||| ||| |||||||||| ||||||||||||||
Sbjct: 1667 atcacgccctaaagaagctgaagacaagtaaaag 1700