Jatropha Genome Database

JcCB0298051.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0298051.10 + phase: 1 /partial
         (389 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29700.m000771 4-hydroxybenzoate octaprenyltransferase, putative       305   1e-82

>29700.m000771 4-hydroxybenzoate octaprenyltransferase, putative
          Length = 1164

 Score =  305 bits (154), Expect = 1e-82
 Identities = 283/326 (86%)
 Strand = Plus / Plus

                                                                        
Query: 6    ttagatcttgctgttgtgttgccactatacgtggctggagtcttttggacccttgtgtat 65
            |||||||  |||||||||||||| || ||| ||  |||||| ||||||||||||||||||
Sbjct: 838  ttagatccagctgttgtgttgccgctgtacatgagtggagtattttggacccttgtgtat 897

                                                                        
Query: 66   gatacaatatatgcacatcaggataaggaggacgatttgaaagtaggtgttaaatcaact 125
            || ||||| ||||||||||||||||||||||| ||| | ||||| |||||||||||||||
Sbjct: 898  gacacaatctatgcacatcaggataaggaggatgatctaaaagtgggtgttaaatcaact 957

                                                                        
Query: 126  gccttgagatttggggattcaacaaaggaatggatcactgggtttggaattgcttgcatt 185
            ||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||| 
Sbjct: 958  gccctgagatttggagattcaacaaaggaatggatcactgggtttggaattgcatgcatc 1017

                                                                        
Query: 186  agtagtcttgctcttagtggagtcagtgccgatcttggctggccattttatgcatttctg 245
             | |||||||| ||||| ||||||| |||  || |||| ||||| |||||||||||| ||
Sbjct: 1018 ggcagtcttgcccttagcggagtcaatgctaatattgggtggccgttttatgcatttttg 1077

                                                                        
Query: 246  gcagctgcctctggacatttgacttggcaaatatggactgttgacctatcaagcagggca 305
             ||||||  |||||||||||  |||||||||||||||| |||||| | ||| || || | 
Sbjct: 1078 acagctggttctggacatttagcttggcaaatatggacagttgacttgtcatgccggtcg 1137

                                      
Query: 306  gattgcaataaaaagtacgtaaattg 331
            |||||||| |||||||||||| ||||
Sbjct: 1138 gattgcaacaaaaagtacgtatattg 1163