Jatropha Genome Database

JcCB0297821.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0297821.10 - phase: 0 /partial
         (757 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29929.m004707 conserved hypothetical protein                          260   1e-68

>29929.m004707 conserved hypothetical protein
          Length = 1452

 Score =  260 bits (131), Expect = 1e-68
 Identities = 344/415 (82%), Gaps = 20/415 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggccttgaatttttctcatcgacccctctttcc-gggtattctccctgaagataattt 59
           ||||||||||||||||| |||||| |||||||||| ||| ||| | ||||| || |||||
Sbjct: 1   atggccttgaatttttcacatcgaaccctctttcctgggcatt-tacctgaggacaattt 59

                                                                       
Query: 60  ggtttctccaatgaggattgcaaatgggtaccttgttgagggtataccagacaaggttga 119
            ||  | ||||||||  |||| ||||| |||||||||||||         ||||||||||
Sbjct: 60  agtaaccccaatgagacttgctaatggttaccttgttgagg---------acaaggttga 110

                                                                       
Query: 120 taattgctttgattatggaagggataggggcgataggtgcgg---------ctcacagga 170
            ||||||||||||||||| ||||||||| | |||||||| ||         ||| |||||
Sbjct: 111 gaattgctttgattatgggagggataggagtgataggtgtgggccgtgtggctctcagga 170

                                                                       
Query: 171 ctccgtgcataaggacattcttgatcttttgccatcagatccttttggcatggacataag 230
            || |||||||||||||||||||| ||||||||||| ||||| ||||||||||| |||||
Sbjct: 171 atcggtgcataaggacattcttgaccttttgccatctgatccctttggcatggatataag 230

                                                                       
Query: 231 tactacttttactgcaattacagggtggctcgaagatttggaggtggactatggtgggta 290
            ||||| ||||||||  |||| || |||||||| ||||||||| ||||||||  ||||||
Sbjct: 231 cactacatttactgcccttactggttggctcgaggatttggagatggactatactgggta 290

                                                                       
Query: 291 tggtagagatcaggttgccactagtggtgggaattatcagttgtttgctgggttgaattt 350
           | |||| ||||||||||| ||||||| |||||  ||||| ||||||||||||||||||||
Sbjct: 291 tagtagtgatcaggttgctactagtgatgggagctatcaattgtttgctgggttgaattt 350

                                                                  
Query: 351 tatttggaacaatgcaatgaggttccaaactttccctgggaacatgggatttgat 405
           |||||||| |||||||||| ||||||||| ||| || |||| |||| | ||||||
Sbjct: 351 tatttggagcaatgcaatgcggttccaaaattttccagggagcatgaggtttgat 405



 Score =  111 bits (56), Expect = 6e-24
 Identities = 119/140 (85%)
 Strand = Plus / Plus

                                                                       
Query: 618 ggtttgttccgacggagatggtggagctcctcatggagcttttggttttgcccttggtta 677
           |||| |||| || |||||||  ||||||||||||  |||| ||||||||||||||| || 
Sbjct: 585 ggttagttctgatggagatgtaggagctcctcattcagctcttggttttgcccttgcttt 644

                                                                       
Query: 678 tctcggggtgcgggatcttcttgttgttgaaacagtgtgcaggtcattgcgctctacagt 737
           ||| || ||||||||||||||||||||||||||||| ||||| ||| |||| |  || ||
Sbjct: 645 tcttggtgtgcgggatcttcttgttgttgaaacagtttgcagatcactgcgttggacggt 704

                               
Query: 738 tcggagtgacccacttttat 757
           ||||| ||| ||||||||||
Sbjct: 705 tcggaatgatccacttttat 724