Jatropha Genome Database

JcCB0296601.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0296601.10 + phase: 2 /pseudo/partial
         (514 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29222.m000399 leucine-rich repeat containing protein, putative         56   2e-07
29222.m000397 Disease resistance protein RGA2, putative                56   2e-07

>29222.m000399 leucine-rich repeat containing protein, putative
          Length = 2367

 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 207 acttagcttatgatgttgaggacatcgttgatgagtttga 246
           ||||||||||||||||||| |||||  |||||||||||||
Sbjct: 230 acttagcttatgatgttgaagacatacttgatgagtttga 269


>29222.m000397 Disease resistance protein RGA2, putative
          Length = 3864

 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 207 acttagcttatgatgttgaggacatcgttgatgagtttga 246
           ||||||||||||||||||| |||||  |||||||||||||
Sbjct: 230 acttagcttatgatgttgaagacatacttgatgagtttga 269