Jatropha Genome Database

JcCB0294021.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0294021.10 - phase: 0 
         (342 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29907.m000663 mads box protein, putative                              210   4e-54

>29907.m000663 mads box protein, putative
          Length = 618

 Score =  210 bits (106), Expect = 4e-54
 Identities = 163/182 (89%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctcgtggaaaggttcagatgaaacgcatagaaaatccggtgcatagacaggttacc 60
           |||||| | ||||||||||| |||||| | || |||||||| |||||||| |||||||||
Sbjct: 1   atggctagaggaaaggttcaaatgaaaagaattgaaaatccagtgcataggcaggttacc 60

                                                                       
Query: 61  ttctgcaagcgccgatcagggctcctcaagaaggctaaggagctctctgtgttgtgcgat 120
           ||||||||||||||||| || ||||| |||||||| |||||||| |||||| |||| |||
Sbjct: 61  ttctgcaagcgccgatctggcctccttaagaaggccaaggagctttctgtgctgtgtgat 120

                                                                       
Query: 121 gctgaaattggaattctcattttctccgcccatggaaagctctatgaactagccaccaaa 180
           |||||||||||| || ||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 121 gctgaaattggacttttcattttctccgcccatgggaagctctatgatctagccaccaaa 180

             
Query: 181 gg 182
           ||
Sbjct: 181 gg 182