Jatropha Genome Database
- JcCB0293281.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0293281.10 + phase: 2 /partial
(2068 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30147.m014237 pentatricopeptide repeat-containing protein, putative 1612 0.0
>30147.m014237 pentatricopeptide repeat-containing protein, putative
Length = 2325
Score = 1612 bits (813), Expect = 0.0
Identities = 1727/2029 (85%), Gaps = 2/2029 (0%)
Strand = Plus / Plus
Query: 17 aaagatgatgagtcaaaacatgagactgattgggaaagattactcaagccatttgacctc 76
||||||||||| ||| || ||||||| || ||||||||||||||||| ||||||||||||
Sbjct: 112 aaagatgatgattcagaaaatgagacagaatgggaaagattactcaaaccatttgacctc 171
Query: 77 aaagagcttcagaaatcttttaatcaaatcactccatttcagctctgtaagcttcttgaa 136
|||||||||| | |||||||||||||||||| |||||||| |||||||| | ||| |
Sbjct: 172 aaagagcttcgaagatcttttaatcaaatcaccccatttcaactctgtaaattgcttcta 231
Query: 137 ttgccacttgatgtagtcacatcaatggcattattccaatgggcaggtgcccaaaagggt 196
||||||||||||||| |||||||||||| ||||||||||||||||| |||| |||||
Sbjct: 232 ttgccacttgatgtatccacatcaatggcgatattccaatgggcaggttcccagaagggc 291
Query: 197 tattgccacacatttgaggtctattatttgttaattaataagctcggggaagataaggag 256
|| || ||||||||||| || ||| || |||||||| ||||||| |||| || ||||||
Sbjct: 292 tactgtcacacatttgacgtgtatcatgtgttaattgataagcttggggcagccaaggag 351
Query: 257 tttaaagttatagatagcttgttgttgcagatgaaagaagaagggattgtttttagagag 316
|||||||||||||||| |||||||||||||| ||||| |||||||||| ||||||||||
Sbjct: 352 tttaaagttatagataagttgttgttgcagattaaagaggaagggattgcttttagagag 411
Query: 317 tccctcttcatatgtattatgaaatattatgggagagcatgttttcctggtcaagctact 376
||||||||||| ||||| ||||||||||||||||| || ||| ||||| |||||||||
Sbjct: 412 tccctcttcatttgtatcatgaaatattatgggagggctaatttgcctggccaagctact 471
Query: 377 aggttgttgttggatatgaagggtgttttttcttgtgaaccgacatttaggtcttacaat 436
||| |||| ||||||||||||||||||| || ||||||||| || |||| ||| || |||
Sbjct: 472 aggatgttattggatatgaagggtgtttattgttgtgaaccaacctttaagtcgtataat 531
Query: 437 gttgcattggatgtactggtttctggtaattgccctagtattgcatccaacattttttat 496
|||| |||||| |||| || |||| |||||| |||||| ||||| | || ||||||||
Sbjct: 532 gttgtgttggatatactagtatctgctaattgtcctagtgttgcagctaatgttttttat 591
Query: 497 gaaatgttgagtaagggtgttttgcccactgtttacacatttggggtggttatgaaagca 556
|| |||||||||||||| ||| | |||||||||||||||||||||||||| ||||||||
Sbjct: 592 gagatgttgagtaagggcgttattcccactgtttacacatttggggtggtgatgaaagcg 651
Query: 557 ctttgtatggttaatgaagttgataatgcctgctcactactaagagacatgacaagatat 616
|||||||||||||| |||||||| ||||| ||||||||||| ||||||||||||| | ||
Sbjct: 652 ctttgtatggttaacgaagttgacaatgcttgctcactacttagagacatgacaaaacat 711
Query: 617 gggtgtgtgcctgatgcagtggtctaccagactctcatacatgcactttccaagagggat 676
|| |||||||| || ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 712 ggatgtgtgccaaattcagtggtctaccagactcttatacatgcactttccaagagggat 771
Query: 677 agagtgagtgaagcatcgaaactgttggaggaaatgttcttaatgggttgcaagcctgat 736
||||||| ||| |||| |||||| ||||||||||||||| | ||||||||| |||||||
Sbjct: 772 agagtgaatgaggcattgaaacttttggaggaaatgttcctgatgggttgcctgcctgat 831
Query: 737 gttgataccttcaatgatgtcattcatggtttgtgcaggcttaataggattcatgaggga 796
|||||||||||||||||||| || |||| ||||||||||| || |||||||||||||
Sbjct: 832 gttgataccttcaatgatgttatctatgggttgtgcaggctcaaccggattcatgagggg 891
Query: 797 gcaaaattggtagatcggatgcttctccgaggtttcacccctaatgatatgacttacgga 856
||||||||||| || ||||||||| |||| |||||||||||||||||||| || || ||
Sbjct: 892 gcaaaattggttgaccggatgcttttccggggtttcacccctaatgatattacctatggt 951
Query: 857 gttttaatgcatgggttatgtaccacaggttgtgttgatgaagcccaggtattgttgaac 916
||| ||||| ||||||| || | || ||||||||||||||||||||||| |||
Sbjct: 952 gttctaatgaatgggttgtgcagagtggggaaagttgatgaagcccaggtattgttaaac 1011
Query: 917 aaagtccctggtccaaatgctgttcactttaatatcttgatcaatgggtatgtgaagagc 976
||||||||| |||||||| ||| ||||| | |||||||||||||||||||||||| ||
Sbjct: 1012 aaagtccctactccaaatgatgtgcacttcactatcttgatcaatgggtatgtgaaaagt 1071
Query: 977 aggcgcttggataaagccaaggcacttttttatgataggatgttaagtaatggatataga 1036
||||||||||| |||| || || |||| ||||||| |||| ||| ||||||| |||
Sbjct: 1072 gggcgcttggatgaagcgaatgcttttttgtatgataagatgataaaaaatggatgtagg 1131
Query: 1037 cctgatgttttcacatttaatatattgatacaggggctttgcatgaaggggcttatgggt 1096
|||||||||||||||||||| | | ||||||| ||||| |||| ||||||||||||||||
Sbjct: 1132 cctgatgttttcacatttaacacactgatacatgggctctgcaagaaggggcttatgggt 1191
Query: 1097 tcagctcttgatcttgttaatgagatggttgtccatggttgtgagccaaatgcaataaca 1156
|| ||| | ||| | |||||||| ||| | | |||| || ||| ||| ||| |||
Sbjct: 1192 tccgctgtcgatatggttaatgacatgtccgccaatggctgcacgcccaatctaatcaca 1251
Query: 1157 tacactattgtgcttgatgggttctgcaagaaaggtcaactagaggaagcttgtcatgtt 1216
|| |||| | ||||||||||||||||||||||| |||||||||||||||| || |||||
Sbjct: 1252 tatactactttgcttgatgggttctgcaagaaaaatcaactagaggaagctggttatgtt 1311
Query: 1217 tttaatgagatttcggctaagggacttggtctgaatgtagtggggtacaatgccctaata 1276
|| |||||||| || ||||||||| ||| |||||| || |||| ||||||| |||| ||
Sbjct: 1312 ttaaatgagatgtcagctaagggatttgaactgaatataatgggatacaatgtcctatta 1371
Query: 1277 tctgctttgtgcaaggatgggaaggttcatgtagctctgaacatgcttggtgaaatgtcg 1336
|||||| |||||| |||||||||||| | |||||| |||||||||||||||||||
Sbjct: 1372 cgtgctttatgcaagaatgggaaggttcctaaagctctagacatgcttggtgaaatgtca 1431
Query: 1337 agcaaaggattcaagcctgacatatttacatttaatactctaatatttggtttgtgcaag 1396
|||||||| |||||||||||| |||||||| ||||||||||| |||||||| ||||||
Sbjct: 1432 gacaaaggatgcaagcctgacatttttacattcaatactctaatttttggtttatgcaag 1491
Query: 1397 gttgataagatggaggatgccttaggattgtatcgtgatatgttattggagggtgttatt 1456
|| |||| || ||| |||||||||| ||||||||||||||||||| || |||||||||
Sbjct: 1492 gtcgataggaaggaagatgccttagctctgtatcgtgatatgttattagatggtgttatt 1551
Query: 1457 gccaatactgtaacttacaacatactgattcatgcttttttgcaga-gagatgcaattca 1515
|| ||||| |||||||| |||| | |||||||||||||| || ||| ||| ||||| ||
Sbjct: 1552 gctaatacagtaacttataacacattgattcatgcttttctg-agaggaggcgcaataca 1610
Query: 1516 agaagcacttaagcttgtgaatgatatgttatttagagggtatcctctcgatgaaatcac 1575
|||||||||||||||||||||||| |||||||| ||||| | || || |||||||| ||
Sbjct: 1611 agaagcacttaagcttgtgaatgacatgttattcagaggatgcccacttgatgaaattac 1670
Query: 1576 ttacaattgcctaataaaagcattctgcagggctggggccattgagaaaggattaggatt 1635
||||||| ||||||||||||||||||||| |||||||| |||||||| ||| |||||
Sbjct: 1671 ttacaatggcctaataaaagcattctgcaaacttggggccactgagaaagcattgggatt 1730
Query: 1636 gtttgaagaaatgatcgggaagggtctaactcccagtactatctcatgcaatatattgat 1695
|||||| |||||| || |||||| | || |||||| | ||||||||||||| |||||||
Sbjct: 1731 gtttgatgaaatggtcaggaaggatttagttcccagcaatatctcatgcaatttattgat 1790
Query: 1696 taatggcctgtgtagaattggtaaagtacataatgcacttgagtttctaagggatatgat 1755
||||| || |||||| | || |||||| |||||||||||| |||| |||||||||||
Sbjct: 1791 caatggtctatgtagagtcgggaaagtatgtaatgcacttgaacttctgagggatatgat 1850
Query: 1756 tcatcgaggattgtctcctgacattgtcacctacaacagcctcattaatggtttatgcaa 1815
||||||||||||| | |||||| |||| |||||||||||||| |||||||||||||||||
Sbjct: 1851 tcatcgaggattggcccctgacgttgttacctacaacagccttattaatggtttatgcaa 1910
Query: 1816 gatgggacgcattcgggaggctttcagtctctttgagaaattgcgtgttgaaggaataca 1875
||||||| ||||||||||||||||| |||||| | || |||| | ||||||||||||
Sbjct: 1911 gatgggaaacattcgggaggctttcaatctcttcaacaagttgcaggctgaaggaataca 1970
Query: 1876 tcctgattctattacttataatactttgatctgttggtattgcagagaggggatgtttga 1935
|||||| ||||||||||||| |||||||| |||||| ||||||||| ||| ||||||||
Sbjct: 1971 acctgatgctattacttataacactttgatttgttggcattgcagagcgggaatgtttga 2030
Query: 1936 tgatgcctttttactccttcatagaggtgtcaataatgactttgtacctagtgatgtgac 1995
|||||||| ||||||||| | |||||| || | |||| ||| | |||| |||||||||
Sbjct: 2031 tgatgcctatttactcctccttagaggggttgagaatgccttcattcctaatgatgtgac 2090
Query: 1996 atggtatattttggttagcaattttgttaaaaagattggtcaggagaat 2044
||||||||| ||||| ||||||||| ||||| | ||||| ||||||||
Sbjct: 2091 atggtatatcttggtgagcaattttattaaagaaattggcaaggagaat 2139