Jatropha Genome Database
- JcCB0292741.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0292741.10 - phase: 0 /partial
(1134 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30174.m008794 pentatricopeptide repeat-containing protein, putative 1029 0.0
>30174.m008794 pentatricopeptide repeat-containing protein, putative
Length = 3492
Score = 1029 bits (519), Expect = 0.0
Identities = 945/1087 (86%)
Strand = Plus / Plus
Query: 44 tcctcactagacgtactcctaccttagggaaggcaacaatacttgcaataggcaaggcct 103
|||||||||| ||| ||||||| ||||||||||||| |||||||| |||| |||||||
Sbjct: 2366 tcctcactaggcgtgctcctacgccagggaaggcaacagtacttgcagtaggtaaggcct 2425
Query: 104 tccctaaacaactcattccccaggactgccttgttgagggctatatccgagacaccaaat 163
|||||| ||||||||||| ||||| ||||| || |||||||| ||||||||||||||||
Sbjct: 2426 tccctagccaactcattcctcaggattgcctggtggagggctacatccgagacaccaaat 2485
Query: 164 gtgatgatgtatccatcaaggagaaattggagcggctttgtaaaactactactgtgaaga 223
|||| ||||| ||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 2486 gtgaagatgtgtccatcaaggagaaattggagcgactatgtaaaactactactgtgaaga 2545
Query: 224 aaagatacacagtgatgtcaaaagagattctggagaaataccctgaacttgcaactgagg 283
|||||| || || ||||| || ||||| ||||| ||||| |||||| |||||| |||||
Sbjct: 2546 caagatatactgtaatgtccaaggagatcctggaaaaatatcctgaaattgcaattgagg 2605
Query: 284 gcacaccaacaatcaaacaaaggcttgaaatagcaaatcctgcagtcgttgagatggcaa 343
|| || | || ||||||||||||||||| |||||||||||||| || |||||||||||||
Sbjct: 2606 gctcaaccactatcaaacaaaggcttgacatagcaaatcctgcggttgttgagatggcaa 2665
Query: 344 aggaagcaagccttgcttgcatcaaggaatggggaagaccagtggaagatattactcata 403
| |||||||||||||||||||||||||| |||||||| || || |||||||| |||||||
Sbjct: 2666 aagaagcaagccttgcttgcatcaaggagtggggaaggcctgtagaagatatcactcata 2725
Query: 404 ttgtctatgtttcttccagtgagatacgcctacctggtggtgaccttcatctagccactc 463
|||| ||||||||||| |||||||||||| |||| || ||||| ||| |||| || | |
Sbjct: 2726 ttgtttatgtttcttctagtgagatacgcttaccaggcggtgatctttatcttgctagcc 2785
Query: 464 agctaggcttaagaagcgatgttagtcgagtaatgctatactttttaggctgttatggtg 523
|||| |||||||| | |||||| | ||||||||||| |||||| | ||||||||||| |
Sbjct: 2786 agcttggcttaaggaatgatgtttgccgagtaatgctttactttcttggctgttatggcg 2845
Query: 524 gtgtcaccggccttcgagttgctaaggacatagctgaaaacaatccaggaagtcgtgttt 583
||||||| |||||| ||||||| |||||||||||||||||||||||||| || || ||||
Sbjct: 2846 gtgtcactggccttagagttgcaaaggacatagctgaaaacaatccagggagccgcgttt 2905
Query: 584 tattaacgacttctgaaactactatactaggttttcggcccccaaacaaagcacgccctt 643
| ||||| || ||||||||||| ||||| |||||||| || |||||||| ||||||||||
Sbjct: 2906 tgttaaccacctctgaaactaccatacttggttttcgcccaccaaacaaggcacgccctt 2965
Query: 644 atgatcttgtaggggctgcactttttggcgatggagctgcagctgttataattggagcca 703
|||| |||||||||||||||||||| || |||||||||||||||| || ||||| ||
Sbjct: 2966 atgaccttgtaggggctgcacttttcggggatggagctgcagctgcgatcattggtgcgg 3025
Query: 704 accctgtaatagataaggagtctcctttcctggagctgaactatgcagttcagcaatcat 763
|||||||| || || || ||||||||| |||||||||||||||||||||||||||
Sbjct: 3026 accctgtattaagtagtgaatctcctttcatggagctgaactatgcagttcagcaattcc 3085
Query: 764 taccaggtacacaaaatgtcattgatggatgcctttctgaagagggcataaatttcaagc 823
| ||||| || ||| |||| ||||||||| |||||||||||||||| |||||||||||||
Sbjct: 3086 tgccaggaacgcaacatgtaattgatggacgcctttctgaagaggggataaatttcaagc 3145
Query: 824 ttggaagagaccttcctcaaaggattgaagataacatagaggaattctgcaaaaagctca 883
||||||| ||||||||||| | ||||||||||||||||||||| ||||| |||||||| |
Sbjct: 3146 ttggaagggaccttcctcagaagattgaagataacatagaggagttctgtaaaaagctta 3205
Query: 884 tgtcaaaggctggattaaccgagttcaatgatttgttctgggctgtccatccaggtggac 943
|||||||||| |||||||| ||||||||||| ||||| |||||||| || || |||||||
Sbjct: 3206 tgtcaaaggcaggattaactgagttcaatgacttgttttgggctgtgcaccctggtggac 3265
Query: 944 cagctatacttaaccggctagagagtactctgaagctaaacactgaaaaactagagtgca 1003
| || |||||||||||||||||||| ||| ||||| | ||| | || || ||||| ||||
Sbjct: 3266 cggcaatacttaaccggctagagagcactttgaagttgaacgcagagaagctagaatgca 3325
Query: 1004 gcaggagggctttaatggattatggaaatgttagcagcaacactgtattctatgttatcg 1063
|||||| |||| | ||||||||||||||||| |||||||| || |||||||||||||| |
Sbjct: 3326 gcaggaaggctctgatggattatggaaatgtcagcagcaataccgtattctatgttatag 3385
Query: 1064 attacatgagagaagaaatgaagagagatggaggtgaagaatggggacttgccttagctt 1123
| ||||||||||||||| |||||||| | ||| ||||||| ||||| |||||||||||||
Sbjct: 3386 aatacatgagagaagaattgaagagaaagggaagtgaagagtgggggcttgccttagctt 3445
Query: 1124 ttgggcc 1130
|||||||
Sbjct: 3446 ttgggcc 3452