Jatropha Genome Database
- JcCB0290761.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0290761.10 + phase: 0 /partial
(1185 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30076.m004696 endo-1,4-beta-glucanase, putative 426 e-118
30063.m001436 endo-1,4-beta-glucanase, putative 90 4e-17
>30076.m004696 endo-1,4-beta-glucanase, putative
Length = 1797
Score = 426 bits (215), Expect = e-118
Identities = 941/1184 (79%), Gaps = 6/1184 (0%)
Strand = Plus / Plus
Query: 5 tgagttggagcgtgatcgaatacagcgcaaaatatgaagctgttggtgaattagatcacg 64
||||||||||||||||||||||||| |||||||||||||||| ||| ||| |||| ||||
Sbjct: 491 tgagttggagcgtgatcgaatacagtgcaaaatatgaagctgctggagaactagaccacg 550
Query: 65 tcaagaacataattaaatggggcactgactaccttctcaagaccttcaactcctcatcta 124
|||| ||| |||| |||||||||||||||||||||||| ||||||| ||||| ||
Sbjct: 551 tcaaaggcatcattagatggggcactgactaccttctcaacgccttcaattcctctagta 610
Query: 125 aggattcaattggtagtattgcttcacaggttgggggagaatatgatctccattgctgga 184
| | || | | ||| || ||||| ||||||||||| |||||| || || ||||
Sbjct: 611 aa---tggataagcaatatagcctcacaagttgggggagagcatgatcaacactgttgga 667
Query: 185 tgcgaccagaagatattgacactgatgataacaacccacgtcgagcaaccacatgttata 244
|||||||||| || ||||| || ||| |||| ||||||||| |||||| ||||| |
Sbjct: 668 tgcgaccagaggacattgataccgatagtaactacccacgtcatgcaacctggtgttaca 727
Query: 245 actgcccagccttggcagcagaaactgctgctgcattagctgctgcgtccattgtattca 304
|||||||||| |||| ||||| || | ||||||||||||||||| || ||||||||||
Sbjct: 728 actgcccagctgtggccgcagagacggtagctgcattagctgctgcatctattgtattca 787
Query: 305 aggacattg---actattcgaagaagcttgtccatggtgctgaactgttatttagatttg 361
|||| | || ||||||| ||||| |||||||||||||||||| | | ||| ||||
Sbjct: 788 aggagagtggagactattcaaagaaacttgtccatggtgctgaaaagctgtttcagtttg 847
Query: 362 ctacaaaaggtcaaggtgaaaactattcaggcggttcagatccatcctcaactttctata 421
|||| |||||||||||||| || ||| ||| | |||| ||| || | || |||| |
Sbjct: 848 ctactaaaggtcaaggtgagaattataaaggaattccagacccacccacgaccgtctaca 907
Query: 422 actccagtggtttttgggatgagtttgtttggagtggagcttggttgtattgcgcaacag 481
|||| || ||||| ||||| |||||||||||| ||||||||||||||||||| ||||| |
Sbjct: 908 actctagcggtttctgggacgagtttgtttggggtggagcttggttgtattgtgcaactg 967
Query: 482 gaaaaacttcctatcttcaacttgttacctctccggacctggcnnnnnnngactatgctt 541
|||| | ||||||||||| ||| ||||||||| | |||||| ||| |||||
Sbjct: 968 gaaatgatacctatcttcaatttgctacctctcctggcctggccgaaaaggacactgctt 1027
Query: 542 tctggggaggcccgagtcgaggtatacttagttgggacaaaaagcatgctggtgctcagt 601
||||||||||||| | ||| ||| |||| || ||| |||| |||||||| || |||||||
Sbjct: 1028 tctggggaggcccaaatcgcggtgtactaagctggaacaataagcatgccggggctcagt 1087
Query: 602 tgcttctaagccgtatgagaattttcctgggttatggctacccatatgaagaaatgttga 661
||||||||||||||||||| |||||| |||| |||||||||||||| |||||||||||||
Sbjct: 1088 tgcttctaagccgtatgaggattttcttgggctatggctacccatacgaagaaatgttga 1147
Query: 662 ggacatttcacaaacatacagaagaaatcatgtgttcgtatctacgggttttcccatact 721
| |||||||| || ||| |||||| |||||||| ||||| || | | ||||||| ||
Sbjct: 1148 gcacatttcaaaaccatgtagaagacatcatgtgctcgtaccttccagctttcccaacct 1207
Query: 722 ttcatcgaaccaaaggaggattgatcctagtaaacaataggagaccacggcctcttcaat 781
| | |||||||||||||||||||||| | | ||| | | ||||| ||||||||||||
Sbjct: 1208 tcaagcgaaccaaaggaggattgatccaactcaaccacggtcgaccaaggcctcttcaat 1267
Query: 782 atatagtgaatgcagctttcatggctatcctttacagtgattatcttgatggcaaattgg 841
|| || ||||||||||||||||||| || | ||||||||||||||| | ||| |||
Sbjct: 1268 atgcagcaaatgcagctttcatggctacactcttcagtgattatcttgaagccaatctgg 1327
Query: 842 tttcaggatggcaatgtggggctaacttttacacaactgaaactttgcgggacttggcga 901
| || |||||||||||||| | |||||||| | |||| ||||||| | || || |
Sbjct: 1328 tatcgggatggcaatgtggacaggaattttacaccaatgaagctttgcgcaattttgcaa 1387
Query: 902 gaaagcagattaattacatcctcggaaaaaatcatcagagtattagctatgttgtaggat 961
| | |||||| |||||||||| || ||||||| | ||| || ||| ||||||| |
Sbjct: 1388 ggagccagattgattacatcctaggtaaaaatccttgtgatatgagttatattgtaggct 1447
Query: 962 ttggcaatcattttccacagcatgtgcaccacagaggcgcttcaattccgaacgataagg 1021
|||||| ||||| || ||||| | ||||| |||| |||||||| || ||| ||||
Sbjct: 1448 ttggcagccatttcccgcagcaagcacaccatcgaggtgcttcaatcccaaacagcaagg 1507
Query: 1022 tcaagtatggctgtgaaggaggatggaaatggagaaatactcgaaggccaaatccaaata 1081
|||||||| | ||| ||| |||||| ||||| | || |||||| |||||||||||||
Sbjct: 1508 tcaagtatagatgtaaagatggatggcaatggcaagttagtcgaagaccaaatccaaata 1567
Query: 1082 ttattgttggagccatggttggcggtcctgaccaaagagatgatttccaggatatccgtt 1141
||| | ||||||||||||| ||||| || | ||||| ||||||||||||||||
Sbjct: 1568 caattataggagccatggttgcgggtccagataaggaagatgggttccaggatatccgtt 1627
Query: 1142 ccaattacaattacacagagtcaaccattgcaggaaatgcaggt 1185
||| ||||||||||| ||| | || ||||| ||||||||||||
Sbjct: 1628 acaactacaattacactgagcctacaattgcgggaaatgcaggt 1671
>30063.m001436 endo-1,4-beta-glucanase, putative
Length = 1866
Score = 89.7 bits (45), Expect = 4e-17
Identities = 93/109 (85%)
Strand = Plus / Plus
Query: 5 tgagttggagcgtgatcgaatacagcgcaaaatatgaagctgttggtgaattagatcacg 64
|||| ||||| |||||||| |||||||| ||||||||||||| |||||| | |||| |
Sbjct: 548 tgagctggagtgtgatcgagtacagcgctaaatatgaagctgctggtgagcttaatcatg 607
Query: 65 tcaagaacataattaaatggggcactgactaccttctcaagaccttcaa 113
|||| | || ||||||||||| ||||| ||||||||||||||||||||
Sbjct: 608 tcaaagaaattattaaatggggaactgattaccttctcaagaccttcaa 656
Score = 77.8 bits (39), Expect = 1e-13
Identities = 90/107 (84%)
Strand = Plus / Plus
Query: 568 cttagttgggacaaaaagcatgctggtgctcagttgcttctaagccgtatgagaattttc 627
||||| |||||||| |||| ||||||||||||| |||||||||| ||| ||||| | |||
Sbjct: 1123 cttagctgggacaacaagcttgctggtgctcaggtgcttctaagtcgtttgagattgttc 1182
Query: 628 ctgggttatggctacccatatgaagaaatgttgaggacatttcacaa 674
|| | ||| ||||||||||||||||| || || |||||||||||
Sbjct: 1183 ttgagccctggttacccatatgaagaaatattaagaacatttcacaa 1229
Score = 63.9 bits (32), Expect = 2e-09
Identities = 155/196 (79%)
Strand = Plus / Plus
Query: 907 cagattaattacatcctcggaaaaaatcatcagagtattagctatgttgtaggatttggc 966
|||||| ||||||| | |||||||||| || || || || |||||||| || ||||||
Sbjct: 1462 cagattgattacattttgggaaaaaatcctcggaaaatgagttatgttgtggggtttggc 1521
Query: 967 aatcattttccacagcatgtgcaccacagaggcgcttcaattccgaacgataaggtcaag 1026
||||||| |||| | ||||| ||||||||||| || || || || || | ||| | |||
Sbjct: 1522 aatcattatccaaaacatgtccaccacagaggtgcatccatccctaagaacaagattaag 1581
Query: 1027 tatggctgtgaaggaggatggaaatggagaaatactcgaaggccaaatccaaatattatt 1086
||| ||| ||||||||||||| ||||| | || || |||||| ||||||| |||
Sbjct: 1582 tataactgcaaaggaggatggaagtggagggacacctcaaagccaaacccaaatacaatt 1641
Query: 1087 gttggagccatggttg 1102
||||||||||||||||
Sbjct: 1642 gttggagccatggttg 1657