Jatropha Genome Database
- JcCB0290191.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0290191.10 + phase: 0
(489 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29780.m001362 nucleic acid binding protein, putative 458 e-128
29780.m001361 zinc finger protein, putative 434 e-121
30078.m002347 nucleic acid binding protein, putative 194 3e-49
29883.m001956 nucleic acid binding protein, putative 172 1e-42
29643.m000323 nucleic acid binding protein, putative 149 2e-35
29794.m003304 nucleic acid binding protein, putative 137 7e-32
29983.m003121 nucleic acid binding protein, putative 127 7e-29
28694.m000662 nucleic acid binding protein, putative 121 4e-27
29647.m001996 nucleic acid binding protein, putative 105 2e-22
30170.m014220 nucleic acid binding protein, putative 101 4e-21
30128.m008805 nucleic acid binding protein, putative 90 1e-17
29646.m001073 nucleic acid binding protein, putative 84 9e-16
29780.m001390 nucleic acid binding protein, putative 62 3e-09
30128.m008580 nucleic acid binding protein, putative 62 3e-09
>29780.m001362 nucleic acid binding protein, putative
Length = 1770
Score = 458 bits (231), Expect = e-128
Identities = 315/343 (91%)
Strand = Plus / Plus
Query: 144 gttcatatgtgaagtatgcaacaaaggttttcaaagagagcaaaacctacagctccacag 203
|||||||||||| |||||||||||||| || ||||| |||||||||||||||||||||||
Sbjct: 213 gttcatatgtgaggtatgcaacaaagggttccaaagggagcaaaacctacagctccacag 272
Query: 204 aagaggacacaacctcccatggaagctaaagcaaaagactacaaaagaagtgaagaggaa 263
||||||||| ||||| || |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 273 aagaggacataacctgccttggaagctaaagcagaagactacaaaagaagtgaagaggaa 332
Query: 264 agtgtatttatgccctgaacccacatgcgtccaccatgacccttctagggctcttggtga 323
|| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ggtctatttgtgccctgagcccacatgcgtccaccatgacccttctagggctcttggtga 392
Query: 324 ccttactggtatcaagaaacactattcaagaaaacatggtgagaaaaaatggaagtgtga 383
|||||||||||||||||||| ||||| |||||||||||||| || ||||||||||||||
Sbjct: 393 tcttactggtatcaagaaacattattctagaaaacatggtgaaaagaaatggaagtgtga 452
Query: 384 gaaatgttcaaagagatatgctgtgcaatctgattggaaagcccattctaagacttgtgg 443
|||||| || ||| | |||||||| ||||||||||||||||| |||||||| ||||||||
Sbjct: 453 gaaatgctctaagcgttatgctgttcaatctgattggaaagctcattctaaaacttgtgg 512
Query: 444 cactagagaatatagatgtgactgtggcactcttttttcaagg 486
|||| ||||||| |||||||||||||||||||| || ||||||
Sbjct: 513 cactcgagaatacagatgtgactgtggcactctcttctcaagg 555
>29780.m001361 zinc finger protein, putative
Length = 1716
Score = 434 bits (219), Expect = e-121
Identities = 312/343 (90%)
Strand = Plus / Plus
Query: 144 gttcatatgtgaagtatgcaacaaaggttttcaaagagagcaaaacctacagctccacag 203
||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||| ||
Sbjct: 237 gttcatatgtgaagtatgcaacaaagggtttcaaagggagcaaaacttacagctccatag 296
Query: 204 aagaggacacaacctcccatggaagctaaagcaaaagactacaaaagaagtgaagaggaa 263
||||||||| ||||| || |||||||||||||| ||||| ||||| ||||||||||| ||
Sbjct: 297 aagaggacataacctaccttggaagctaaagcagaagacaacaaaggaagtgaagagaaa 356
Query: 264 agtgtatttatgccctgaacccacatgcgtccaccatgacccttctagggctcttggtga 323
|| ||||| |||||||| ||||| ||||| ||||| ||| | ||||||||||| |||||
Sbjct: 357 ggtttatttgtgccctgagcccacgtgcgtacaccacgacgcatctagggctctcggtga 416
Query: 324 ccttactggtatcaagaaacactattcaagaaaacatggtgagaaaaaatggaagtgtga 383
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 417 ccttactggcatcaagaaacactattcaagaaaacatggtgagaagaaatggaagtgtga 476
Query: 384 gaaatgttcaaagagatatgctgtgcaatctgattggaaagcccattctaagacttgtgg 443
||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 477 gaaatgttcaaagaggtacgctgttcaatctgattggaaagcccattctaagacttgtgg 536
Query: 444 cactagagaatatagatgtgactgtggcactcttttttcaagg 486
|||| |||| || |||||||||||||||||||| || ||||||
Sbjct: 537 cactcgagagtacagatgtgactgtggcactctcttctcaagg 579
Score = 83.8 bits (42), Expect = 9e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 1 atggctgctgcttcatcatcttcgccattttttcgggctagagaggaaaatcaaaaccag 60
||||||||||||||||||||||| || ||||| || ||||||||||||||||| ||||||
Sbjct: 1 atggctgctgcttcatcatcttctccttttttccgagctagagaggaaaatcacaaccag 60
Query: 61 at 62
||
Sbjct: 61 at 62
>30078.m002347 nucleic acid binding protein, putative
Length = 1578
Score = 194 bits (98), Expect = 3e-49
Identities = 269/326 (82%)
Strand = Plus / Plus
Query: 145 ttcatatgtgaagtatgcaacaaaggttttcaaagagagcaaaacctacagctccacaga 204
||||| |||||| ||||||| |||||||| |||||||| |||||| | ||||| || |||
Sbjct: 208 ttcatttgtgaaatatgcaataaaggtttccaaagagaccaaaacttgcagcttcataga 267
Query: 205 agaggacacaacctcccatggaagctaaagcaaaagactacaaaagaagtgaagaggaaa 264
||||| || ||||| ||||||||||| ||||||| || | ||||| || |||| |||
Sbjct: 268 agagggcataaccttccatggaagctgaagcaaagaaccaacaaagaggttaagaagaag 327
Query: 265 gtgtatttatgccctgaacccacatgcgtccaccatgacccttctagggctcttggtgac 324
|||||| ||||||||||| || |||||||||||||| | || || ||||| || ||
Sbjct: 328 gtgtatatatgccctgaaaagacttgcgtccaccatgatgcctcgagagctctcggagat 387
Query: 325 cttactggtatcaagaaacactattcaagaaaacatggtgagaaaaaatggaagtgtgag 384
|| || || || || || |||| | | |||||||| |||||||||||||||||||||
Sbjct: 388 ctcaccgggataaaaaagcactttagccggaaacatggagagaaaaaatggaagtgtgag 447
Query: 385 aaatgttcaaagagatatgctgtgcaatctgattggaaagcccattctaagacttgtggc 444
||||||||||||| |||||| || ||||| || |||||||| || || ||||||||||||
Sbjct: 448 aaatgttcaaagaaatatgcagttcaatcagactggaaagctcactccaagacttgtggc 507
Query: 445 actagagaatatagatgtgactgtgg 470
||||||||||||| ||||||||||||
Sbjct: 508 actagagaatataaatgtgactgtgg 533
>29883.m001956 nucleic acid binding protein, putative
Length = 1401
Score = 172 bits (87), Expect = 1e-42
Identities = 147/167 (88%)
Strand = Plus / Plus
Query: 313 gctcttggtgaccttactggtatcaagaaacactattcaagaaaacatggtgagaaaaaa 372
||||| ||||||||||| ||||||||||||||||||| ||||||||||| || || |||
Sbjct: 400 gctctcggtgaccttacaggtatcaagaaacactattgcagaaaacatggagaaaagaaa 459
Query: 373 tggaagtgtgagaaatgttcaaagagatatgctgtgcaatctgattggaaagcccattct 432
||||||||||| ||||| ||||||| |||||||| |||||||||||||| || ||||||
Sbjct: 460 tggaagtgtgaaaaatgctcaaagatctatgctgttcaatctgattggaaggctcattct 519
Query: 433 aagacttgtggcactagagaatatagatgtgactgtggcactctttt 479
|| || ||||| |||||||| ||||||||||||||||| || |||||
Sbjct: 520 aaaacctgtggaactagagagtatagatgtgactgtggaaccctttt 566
>29643.m000323 nucleic acid binding protein, putative
Length = 1632
Score = 149 bits (75), Expect = 2e-35
Identities = 261/323 (80%)
Strand = Plus / Plus
Query: 160 tgcaacaaaggttttcaaagagagcaaaacctacagctccacagaagaggacacaacctc 219
|||||||| |||||||||||||| |||||||| || ||||| |||||||||||||| ||
Sbjct: 205 tgcaacaagggttttcaaagagaccaaaaccttcaactccatagaagaggacacaatctt 264
Query: 220 ccatggaagctaaagcaaaagactacaaaagaagtgaagaggaaagtgtatttatgccct 279
||||||||| | ||||| | | || ||||| || || | |||||| ||| | ||||||
Sbjct: 265 ccatggaagttgaagcagagatcgactaaagaggttaaaaagaaagtatatatctgccct 324
Query: 280 gaacccacatgcgtccaccatgacccttctagggctcttggtgaccttactggtatcaag 339
||| | || || |||||||| || || || ||| | |||||||| || || || |||
Sbjct: 325 gaaaagagctgtgtacaccatgatccatcaagagctttaggtgacctgacaggaataaag 384
Query: 340 aaacactattcaagaaaacatggtgagaaaaaatggaagtgtgagaaatgttcaaagaga 399
|| || | | ||||||||||| || || || ||||||||||||||||||||||||| |
Sbjct: 385 aagcattttagcagaaaacatggagaaaagaagtggaagtgtgagaaatgttcaaagaaa 444
Query: 400 tatgctgtgcaatctgattggaaagcccattctaagacttgtggcactagagaatataga 459
||||| || ||||| ||||||||||| ||| ||||| ||||| || ||||| ||||||
Sbjct: 445 tatgcagttcaatcagattggaaagctcatagtaagatctgtggaaccagagagtataga 504
Query: 460 tgtgactgtggcactcttttttc 482
||||||||||||||||| |||||
Sbjct: 505 tgtgactgtggcactctcttttc 527
>29794.m003304 nucleic acid binding protein, putative
Length = 1341
Score = 137 bits (69), Expect = 7e-32
Identities = 255/317 (80%)
Strand = Plus / Plus
Query: 163 aacaaaggttttcaaagagagcaaaacctacagctccacagaagaggacacaacctccca 222
|||||||| ||||| ||||| || || || ||||| || |||||||| ||||| || ||
Sbjct: 91 aacaaaggatttcagagagatcagaatcttcagcttcatagaagagggcacaatcttccg 150
Query: 223 tggaagctaaagcaaaagactacaaaagaagtgaagaggaaagtgtatttatgccctgaa 282
|||||| ||||||||| || | |||||||||| | ||| || ||| |||| || |||
Sbjct: 151 tggaagttaaagcaaagaacaaacaaagaagtgagaaagaaggtatatgtatgtccagaa 210
Query: 283 cccacatgcgtccaccatgacccttctagggctcttggtgaccttactggtatcaagaaa 342
| |||||||| |||||||| || || ||||| || ||||||||||| || ||||||||
Sbjct: 211 actacatgcgtgcaccatgatccatcaagggcactcggtgaccttacaggaatcaagaag 270
Query: 343 cactattcaagaaaacatggtgagaaaaaatggaagtgtgagaaatgttcaaagagatat 402
|||| || ||||| ||||||||||| || ||||| ||||| || || ||||| | |||
Sbjct: 271 cacttttgcagaaagcatggtgagaagaagtggaaatgtgaaaagtgctcaaaacgttat 330
Query: 403 gctgtgcaatctgattggaaagcccattctaagacttgtggcactagagaatatagatgt 462
||||| ||||| ||||||||||| || || |||| ||| ||||| ||||| |||||||||
Sbjct: 331 gctgttcaatcagattggaaagctcactccaagatttgcggcacaagagagtatagatgt 390
Query: 463 gactgtggcactctttt 479
|| ||||| || |||||
Sbjct: 391 gattgtggaaccctttt 407
>29983.m003121 nucleic acid binding protein, putative
Length = 1314
Score = 127 bits (64), Expect = 7e-29
Identities = 151/180 (83%)
Strand = Plus / Plus
Query: 304 ccttctagggctcttggtgaccttactggtatcaagaaacactattcaagaaaacatggt 363
|||||||| ||||| || ||||| ||||| || ||||| |||| || ||||| ||||||
Sbjct: 175 ccttctagagctctcggagacctaactggaataaagaagcacttttgcagaaagcatggt 234
Query: 364 gagaaaaaatggaagtgtgagaaatgttcaaagagatatgctgtgcaatctgattggaaa 423
||||| ||||||||||| ||||||||||||||||||||||| ||||| || |||||||||
Sbjct: 235 gagaagaaatggaagtgcgagaaatgttcaaagagatatgccgtgcagtcagattggaaa 294
Query: 424 gcccattctaagacttgtggcactagagaatatagatgtgactgtggcactcttttttca 483
|| || || || || ||||| |||||||| || | ||| |||||||| ||| | ||||||
Sbjct: 295 gcacactccaaaacctgtgggactagagagtacaaatgcgactgtggaactttattttca 354
>28694.m000662 nucleic acid binding protein, putative
Length = 1659
Score = 121 bits (61), Expect = 4e-27
Identities = 157/189 (83%)
Strand = Plus / Plus
Query: 298 catgacccttctagggctcttggtgaccttactggtatcaagaaacactattcaagaaaa 357
|||||||| || ||||| ||||||||||| || || ||||| ||||||| | |||||
Sbjct: 415 catgacccatcgagggcacttggtgacctgacaggaatcaaaaaacactttagcagaaag 474
Query: 358 catggtgagaaaaaatggaagtgtgagaaatgttcaaagagatatgctgtgcaatctgat 417
||||| ||||| || ||||| ||||| || || ||||| || ||||| || ||||| |||
Sbjct: 475 catggcgagaagaagtggaaatgtgataagtgctcaaaaaggtatgcagttcaatcagat 534
Query: 418 tggaaagcccattctaagacttgtggcactagagaatatagatgtgactgtggcactctt 477
|||||||| ||||| ||||| ||||||||||| ||||| |||||||||||||| || |||
Sbjct: 535 tggaaagctcattccaagacctgtggcactagggaatacagatgtgactgtggaaccctt 594
Query: 478 ttttcaagg 486
|| ||||||
Sbjct: 595 ttctcaagg 603
>29647.m001996 nucleic acid binding protein, putative
Length = 1896
Score = 105 bits (53), Expect = 2e-22
Identities = 221/277 (79%)
Strand = Plus / Plus
Query: 149 tatgtgaagtatgcaacaaaggttttcaaagagagcaaaacctacagctccacagaagag 208
|||||||| ||||||||||||| |||||||| || ||||| ||||| || || |||||||
Sbjct: 344 tatgtgaaatatgcaacaaagggtttcaaagggatcaaaatctacaactgcatagaagag 403
Query: 209 gacacaacctcccatggaagctaaagcaaaagactacaaaagaagtgaagaggaaagtgt 268
| || ||||| ||||||||||||| ||||| ||||||| ||||| |||| ||| |
Sbjct: 404 gccataaccttccatggaagctaaggcaaagaactacaactgaagtaaagaaacgagtct 463
Query: 269 atttatgccctgaacccacatgcgtccaccatgacccttctagggctcttggtgacctta 328
|| ||||||||||||| ||||| || ||||| |||| || | || | || ||||| |
Sbjct: 464 atatatgccctgaaccaacatgtgttcaccacaacccggctcgtgcattgggagacctaa 523
Query: 329 ctggtatcaagaaacactattcaagaaaacatggtgagaaaaaatggaagtgtgagaaat 388
| || || || || || | | ||||||||||||||||| |||||||| ||||| || |
Sbjct: 524 caggcattaaaaagcattttagcagaaaacatggtgagaagaaatggaaatgtgataagt 583
Query: 389 gttcaaagagatatgctgtgcaatctgattggaaagc 425
| || |||| |||||| || |||||||||||||||||
Sbjct: 584 gctccaagaaatatgcagttcaatctgattggaaagc 620
>30170.m014220 nucleic acid binding protein, putative
Length = 1509
Score = 101 bits (51), Expect = 4e-21
Identities = 138/167 (82%)
Strand = Plus / Plus
Query: 308 ctagggctcttggtgaccttactggtatcaagaaacactattcaagaaaacatggtgaga 367
|||| ||||| |||||| | ||||| ||||||||||||| | ||||| ||||| || |
Sbjct: 365 ctagagctctcggtgacttgactggcatcaagaaacacttctgcagaaagcatggagaaa 424
Query: 368 aaaaatggaagtgtgagaaatgttcaaagagatatgctgtgcaatctgattggaaagccc 427
| |||||||||||||| | || ||||||| |||||| || || || |||||||||||||
Sbjct: 425 agaaatggaagtgtgaaaggtgctcaaagaaatatgcagtacagtcagattggaaagccc 484
Query: 428 attctaagacttgtggcactagagaatatagatgtgactgtggcact 474
| |||||||||||||||||||| |||| |||||| |||||||||
Sbjct: 485 acatgaagacttgtggcactagagagtataaatgtgattgtggcact 531
>30128.m008805 nucleic acid binding protein, putative
Length = 1542
Score = 89.7 bits (45), Expect = 1e-17
Identities = 102/121 (84%)
Strand = Plus / Plus
Query: 353 gaaaacatggtgagaaaaaatggaagtgtgagaaatgttcaaagagatatgctgtgcaat 412
||||||||||||| || |||||||| ||||| ||||| ||||||| |||||| || ||||
Sbjct: 500 gaaaacatggtgaaaagaaatggaaatgtgataaatgctcaaagaaatatgcagtacaat 559
Query: 413 ctgattggaaagcccattctaagacttgtggcactagagaatatagatgtgactgtggca 472
||||||||||||| || | ||||| || ||||| | || |||| ||||||||||||||
Sbjct: 560 ctgattggaaagctcacgcaaagacctgcggcaccaaggagtataaatgtgactgtggca 619
Query: 473 c 473
|
Sbjct: 620 c 620
>29646.m001073 nucleic acid binding protein, putative
Length = 1563
Score = 83.8 bits (42), Expect = 9e-16
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 355 aaacatggtgagaaaaaatggaagtgtgagaaatgttcaaagagatatgctgtgcaatct 414
|||||||| ||||| || ||||| ||||| |||||||| |||| ||||||||| || |||
Sbjct: 391 aaacatggagagaagaagtggaaatgtgataaatgttctaagaaatatgctgttcagtct 450
Query: 415 gattggaaagcccattctaagacttgtggcactagaga 452
||||||||||| || ||||||| ||| ||||| |||||
Sbjct: 451 gattggaaagctcactctaagatttgcggcaccagaga 488
>29780.m001390 nucleic acid binding protein, putative
Length = 1434
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 379 tgtgagaaatgttcaaagagatatgctgtgcaatctgattggaaagcccattctaagact 438
|||||||||||||| || | |||||||| |||||||||| |||||||| |||||||
Sbjct: 445 tgtgagaaatgttctaaaggttatgctgtccaatctgattacaaagcccaccttaagact 504
Query: 439 tgtggcactag 449
|||||||||||
Sbjct: 505 tgtggcactag 515
>30128.m008580 nucleic acid binding protein, putative
Length = 1362
Score = 61.9 bits (31), Expect = 3e-09
Identities = 97/119 (81%)
Strand = Plus / Plus
Query: 352 agaaaacatggtgagaaaaaatggaagtgtgagaaatgttcaaagagatatgctgtgcaa 411
||||||||||| || || ||||||||||| || ||||| |||||| | |||||||| |||
Sbjct: 364 agaaaacatggagaaaagaaatggaagtgcgacaaatgctcaaagtgttatgctgttcaa 423
Query: 412 tctgattggaaagcccattctaagacttgtggcactagagaatatagatgtgactgtgg 470
|| || ||||| || || | |||| ||||||||| ||||| ||| | ||||| |||||
Sbjct: 424 tcagactggaaggcgcacacaaagatttgtggcaccagagagtatcgctgtgattgtgg 482