Jatropha Genome Database

JcCB0288881.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0288881.10 - phase: 0 /partial
         (480 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29651.m000291 succinate dehydrogenase, putative                       232   2e-60

>29651.m000291 succinate dehydrogenase, putative
          Length = 1869

 Score =  232 bits (117), Expect = 2e-60
 Identities = 184/205 (89%), Gaps = 1/205 (0%)
 Strand = Plus / Plus

                                                                       
Query: 277 ggtagctgccaaggagtgatcgcattaaatatggaggatggaacattacatcgattccgt 336
           ||||||||||||||||| || ||  | |||||||| ||||| || |||||||||||||||
Sbjct: 616 ggtagctgccaaggagtaattgctatgaatatggaagatggtactttacatcgattccgt 675

                                                                       
Query: 337 gctgcttcaactatcctggccactgggggctatggtagagcgtacttttctgcaacctca 396
           |||||||| || ||||||||||| |||||||||||||| || ||||||||||||||||||
Sbjct: 676 gctgcttccaccatcctggccacagggggctatggtagggcatacttttctgcaacctca 735

                                                                       
Query: 397 gctcatacatgtactggagatggcaatgctatggttgcaagggctgggcttccactaca- 455
           ||||||||||| ||||||||||||||||||||||||||| ||||||||||||| || || 
Sbjct: 736 gctcatacatgcactggagatggcaatgctatggttgcacgggctgggcttcccctccag 795

                                    
Query: 456 gatcttgagtttgttcaatttcatc 480
           ||||| || |||||||| |||||||
Sbjct: 796 gatctggaatttgttcagtttcatc 820