Jatropha Genome Database

JcCB0286721.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0286721.10 - phase: 0 /partial
         (288 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008740 conserved hypothetical protein                          240   4e-63

>30128.m008740 conserved hypothetical protein
          Length = 1203

 Score =  240 bits (121), Expect = 4e-63
 Identities = 226/261 (86%)
 Strand = Plus / Plus

                                                                        
Query: 1    ctgttaactggccggattccggtggataccaaacggcctactggggaacatgtacttgtc 60
            ||||||||||||||||| || ||||||||||| |||||  |||| |||||||||||||| 
Sbjct: 886  ctgttaactggccggatacctgtggataccaagcggccccctggtgaacatgtacttgtt 945

                                                                        
Query: 61   tcttgggctcttccaagattaactaacagagagaaagtagcagaaatggttgacccagtt 120
            || |||||||||||||| |||||||||||||| || || |  ||||||||||| ||||||
Sbjct: 946  tcctgggctcttccaaggttaactaacagagaaaaggttgtggaaatggttgatccagtt 1005

                                                                        
Query: 121  cttaaaggcaactactcaaagaaagatttaattcaggtagctgccattgctgccatgtgt 180
             |    || |||||||| ||||||||||| ||||||||||| || ||||| |||||||||
Sbjct: 1006 ttgcgtgggaactactcgaagaaagatttgattcaggtagcggcaattgcagccatgtgt 1065

                                                                        
Query: 181  gtgcaaccagaagcagattacaggcctttaatgacagatgtggtgcaatcactgattcct 240
            || |||||||||||||||||| ||||||||||||| |||||||| || ||||| || |||
Sbjct: 1066 gttcaaccagaagcagattaccggcctttaatgaccgatgtggttcagtcactaatccct 1125

                                 
Query: 241  ctgatcaagaacctttcttca 261
            ||| |||||||||| ||||||
Sbjct: 1126 ctggtcaagaacctctcttca 1146