Jatropha Genome Database

JcCB0284841.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0284841.10 + phase: 0 /partial
         (264 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30027.m000843 ATATH8, putative                                        165   2e-40
29933.m001441 ATATH13, putative                                        86   1e-16

>30027.m000843 ATATH8, putative
          Length = 1491

 Score =  165 bits (83), Expect = 2e-40
 Identities = 151/172 (87%), Gaps = 5/172 (2%)
 Strand = Plus / Plus

                                                                        
Query: 47   atcctgctgagtgcatacagcagctgcttgagcatgttaggcgccataaagtaaacattg 106
            |||| ||||| ||||| ||||| ||||||||||||||||| ||||||||||| |||||||
Sbjct: 1238 atccagctgaatgcatgcagcaactgcttgagcatgttagacgccataaagtcaacattg 1297

                                                                        
Query: 107  atggagatatttgcattgtgatggtaacgactttggttcttgagggttggcaacagaagc 166
            ||||  || ||||||| ||||||||||| ||||||||||||||||| ||||||| |||||
Sbjct: 1298 atggctatgtttgcatcgtgatggtaactactttggttcttgagggatggcaacggaagc 1357

                                                                
Query: 167  tggatccagagtataatgtgagtgca----ttgcagtcattgctatttaaag 214
            |||||||||| ||| |||||| ||||    ||||| ||||||||||||||||
Sbjct: 1358 tggatccagaatatgatgtga-tgcacactttgcaatcattgctatttaaag 1408


>29933.m001441 ATATH13, putative
          Length = 1812

 Score = 85.7 bits (43), Expect = 1e-16
 Identities = 106/127 (83%)
 Strand = Plus / Plus

                                                                        
Query: 47   atcctgctgagtgcatacagcagctgcttgagcatgttaggcgccataaagtaaacattg 106
            |||||||||||||||| ||  || | || ||| | || ||||| |||||||| || ||||
Sbjct: 1589 atcctgctgagtgcatgcaagagttactggagaaagtcaggcgtcataaagttaatattg 1648

                                                                        
Query: 107  atggagatatttgcattgtgatggtaacgactttggttcttgagggttggcaacagaagc 166
            ||||  || |||||| ||||||||| || ||||| ||||||||||||||||| | |||||
Sbjct: 1649 atggcaatgtttgcactgtgatggtgacaactttagttcttgagggttggcagcggaagc 1708

                   
Query: 167  tggatcc 173
            |||||||
Sbjct: 1709 tggatcc 1715