Jatropha Genome Database
- JcCB0283991.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0283991.10 + phase: 0 /pseudo/partial
(825 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30190.m010873 eukaryotic translation initiation factor 3 subunit... 708 0.0
>30190.m010873 eukaryotic translation initiation factor 3 subunit,
putative
Length = 1725
Score = 708 bits (357), Expect = 0.0
Identities = 637/729 (87%), Gaps = 1/729 (0%)
Strand = Plus / Plus
Query: 39 gatgatatgaactctgcttattcattgagtgttgaggcagcctatattaatctagaactt 98
||||||||||| ||||||||||| || |||||||| || || |||||||||| |||| ||
Sbjct: 937 gatgatatgaattctgcttattctttaagtgttgaagctgcttatattaatc-agaattt 995
Query: 99 ttcacagcaggttctaattagagatgggaataaggttgcctttgatgaaccaaacccatt 158
|| ||||||||| | ||||| ||||||||||| ||| |||||||||| || ||||| ||
Sbjct: 996 ctcgcagcaggttttgattagggatgggaataaagtttcctttgatgagcctaacccgtt 1055
Query: 159 tgcaaatgaaggagaggaagttgcttctgttgcttataggtataggaggtggaaacttga 218
||||| |||||| ||||||||||||||||| || ||||||||||| |||||||| |||||
Sbjct: 1056 tgcaactgaaggtgaggaagttgcttctgtggcgtataggtatagaaggtggaagcttga 1115
Query: 219 tgatgatatgtatcttgttgctaggtgtgaggtgcagagtgttgtggaggtcaacaagca 278
|||||||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||
Sbjct: 1116 tgatgatatgcatcttgtcgctaggtgtgaggtgcagagtgttgttgaggttaataagca 1175
Query: 279 gaggtcatttttgacactgaatgctctcaatgagtttgatcctaaatattccggagttga 338
||| || |||||||| |||||||| || ||||||||||||||||||||||| || |||||
Sbjct: 1176 gagatcctttttgaccctgaatgcacttaatgagtttgatcctaaatattctggtgttga 1235
Query: 339 ttggagacagaaattggagactcaaagaggtgcggttttggctactgaattgaagaacaa 398
|||||||||||| |||||||| ||| | ||||| ||||| ||||||||||||||||||||
Sbjct: 1236 ttggagacagaagttggagacgcaacgtggtgctgttttagctactgaattgaagaacaa 1295
Query: 399 cgcgaataagttagctcgatggactgctcaagcgcttttggcaagtgcagatttgatgaa 458
|| ||||| || ||| |||||||| ||||| | ||||| ||||| |||||||||||
Sbjct: 1296 tgctaataaattggctaagtggactgcccaagctttgttggccagtgctgatttgatgaa 1355
Query: 459 attaggttttgtttcgagggttcatccaagagatcattataaccatgtgatattggctgt 518
| |||| |||||| ||||||||||| || || ||||| || |||||||| || |||||
Sbjct: 1356 gctgggttatgtttccagggttcatcctagggaccattacaatcatgtgattttagctgt 1415
Query: 519 tcttgggtataagccaagggattttgctgcacagattaatttgaatacatcaaacatgtg 578
| | ||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 1416 tgtggggtataagcctagggattttgctgctcagattaatttgaatacatctaacatgtg 1475
Query: 579 gggaattgtgaagagtattgttgatttgtgtatgaagttgaatgagggcaaatacgtttt 638
||| |||||||| ||||||||||| ||||||||||| ||||||||||||||||| || ||
Sbjct: 1476 ggggattgtgaaaagtattgttgacttgtgtatgaaattgaatgagggcaaatatgtgtt 1535
Query: 639 ggttaaagacccatcaaagccacaagtgagaatttatgaagttcctgctgatgcttttga 698
||| |||||||| || ||||||||||| ||||||||||| |||||||||||||| || ||
Sbjct: 1536 ggtaaaagacccctctaagccacaagtaagaatttatgaggttcctgctgatgcattcga 1595
Query: 699 gaatgattatgtggaggagcctttgcctgaggaagagcaagttcagccccctggcgagga 758
|||||||||||||||||| ||||| |||||||| |||||||||||||| ||||| |||||
Sbjct: 1596 gaatgattatgtggaggaacctttacctgaggaggagcaagttcagccgcctggtgagga 1655
Query: 759 gaccgagaa 767
|| |||||
Sbjct: 1656 cactgagaa 1664