Jatropha Genome Database
- JcCB0281811.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0281811.10 - phase: 0 /partial
(862 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30190.m010873 eukaryotic translation initiation factor 3 subunit... 385 e-106
>30190.m010873 eukaryotic translation initiation factor 3 subunit,
putative
Length = 1725
Score = 385 bits (194), Expect = e-106
Identities = 637/784 (81%), Gaps = 3/784 (0%)
Strand = Plus / Plus
Query: 79 accacatccactctccctctccacgttcccttcgcccccttctcccgatcagaaaaactc 138
||||| |||||||||||| | |||| || ||||| || || ||||| || || ||||||
Sbjct: 85 accacctccactctccctttaaacgtccctttcgctcctttttcccgctccgacaaactc 144
Query: 139 ggtcggatcgccgattggacccgtaacgtcaacaatcctaatgcaaatcggccaaacgcc 198
|| || || |||||||||||||| ||| ||||| || || || ||||| || ||| ||
Sbjct: 145 ggccgaattgccgattggacccgaaacatcaac---ccgaacgctaatcgccctaactcc 201
Query: 199 aacaagaacgcttcggattccgtttttgacttcaccgccgatgattccttccctgctgca 258
|| | || || || ||||||||||||||||||||||| || ||||| |||||||| ||
Sbjct: 202 aaacaaaatgcctccgattccgtttttgacttcaccgctgacgattcattccctgccgcc 261
Query: 259 gctggtgcagccgatgatgactcgaccttccgtctcgttgatggaaaacctcctccacgc 318
| | |||| ||| |||||||| || ||||||||||| || |||||||||||||| ||
Sbjct: 262 accgcagcaggcgacgatgactccactttccgtctcgtggacggaaaacctcctccgcgt 321
Query: 319 cctaaattcggccctaagtggcgattcaatcaacaccgcccgcaactccctcagcgtcgc 378
|| |||||||| ||||||||||| ||||| || ||||| | ||||||||||||||| |||
Sbjct: 322 ccaaaattcggtcctaagtggcggttcaaccagcaccgacagcaactccctcagcggcgc 381
Query: 379 gatgaagaggtggaggctcgcaaacgtgaggcggaaaaggaacgggcgcgccgggatcgc 438
|| || || || || || || || || || || ||||||||||| || || || |||||
Sbjct: 382 gacgaggaagtcgaagcccgtaagcgagaagccgaaaaggaacgcgctcgacgtgatcgt 441
Query: 439 ctatacaatctcaatcgatccaatcaaaaccagccacgtcgcgaggcggcagctttcaag 498
| || ||| | || || || ||||| || |||||||||||||| || |||| || ||
Sbjct: 442 ttgtataatatgaaccggtcaaatcagaatcagccacgtcgcgaagctgcagtatttaaa 501
Query: 499 tcatctgtggatatccagccggagtggaacatgttggaccagattcccttctcaacgttt 558
||||| || ||||| ||||| || ||||||||| | || ||||| || ||||| ||||||
Sbjct: 502 tcatcagttgatattcagccagaatggaacatgcttgatcagatccctttctcgacgttt 561
Query: 559 tcaaagctgtcattctcagtcgctgagccagaagatttacttctctgcggcgggcttgag 618
|| ||||| || || ||||| | |||||||| ||||||||||| |||||||| || ||
Sbjct: 562 tcgaagctttctttttcagttccggagccagaggatttacttctatgcggcggtctcgaa 621
Query: 619 ttctacgacagatcatatgatagagtcacccctaaaaacgagcgtcgtttggagagattc 678
||||||||||| || | ||||||| | || |||||||||||||||||||| || || ||
Sbjct: 622 ttctacgacaggtcgtttgatagaattactcctaaaaacgagcgtcgtttagaaaggttt 681
Query: 679 aaaaaccgaaactttttcaaagtcaccacgactgatgatcctgtgattcggagacttgcc 738
|||||||| || || || ||||| || || |||||||||||||||||| ||||||||||
Sbjct: 682 aaaaaccgtaatttctttaaagttactacaactgatgatcctgtgattaggagacttgca 741
Query: 739 aatgaagataaggctactgtgtttgctacggatactatcctggcaactttgatgtgtgcg 798
||||||||||| |||||||||||||| || |||||||| | || ||||||||||||||
Sbjct: 742 aatgaagataaagctactgtgtttgccactgatactattttagctactttgatgtgtgcc 801
Query: 799 cctaggtcggtatattcgtgggatattgtgattcagagagttggaaacaagctctttttc 858
|| |||| || ||||| ||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 802 ccacggtctgtctattcttgggatattgtgattcagagagtcggaaataagctctttttt 861
Query: 859 gata 862
||||
Sbjct: 862 gata 865