Jatropha Genome Database
- JcCB0280981.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0280981.10 + phase: 1 /pseudo/partial
(808 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29848.m004649 Cellulose synthase A catalytic subunit 6 [UDP-form... 898 0.0
29761.m000416 Cellulose synthase A catalytic subunit 6 [UDP-form... 153 2e-36
29606.m000101 Cellulose synthase A catalytic subunit 6 [UDP-form... 121 7e-27
29637.m000754 Cellulose synthase A catalytic subunit 6 [UDP-form... 90 2e-17
29863.m001055 Cellulose synthase A catalytic subunit 6 [UDP-form... 74 1e-12
>29848.m004649 Cellulose synthase A catalytic subunit 6 [UDP-forming],
putative
Length = 3252
Score = 898 bits (453), Expect = 0.0
Identities = 635/696 (91%), Gaps = 6/696 (0%)
Strand = Plus / Plus
Query: 110 gcaagcactatatggttatgatccagttttgactgaggaagatttggaaccaaacattat 169
|||||| ||||| ||||||||||| || ||||| |||||||||||||||||||| |||||
Sbjct: 1926 gcaagcgctatacggttatgatccggtcttgacagaggaagatttggaaccaaatattat 1985
Query: 170 cgtcaagagttgttgcggatcaagaaagaaaggaagaagcggtaataagaagtatattga 229
|||||||||||||| ||||||| ||||||||| || ||||||||| ||||||||
Sbjct: 1986 tgtcaagagttgttgtggatcaacaaagaaaggtag------taataagaaatatattga 2039
Query: 230 caagaagagggcaatgaaaagaactgaatccactgttcccattttcaatatggaagatat 289
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 2040 caagaagagggcaatgaaaagaactgaatccaccgttccgattttcaatatggaagatat 2099
Query: 290 agaagagggcgttgaaggatatgatgatgagaggtcacttcttatgtcccagaagagtct 349
|| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2100 cgaggagggtgttgaaggatatgatgatgagaggtcacttcttatgtctcagaagagtct 2159
Query: 350 agaaaagcgttttggtcagtcaccagtttttattgcggccaccttcatggaacagggagg 409
|||||||||||||||||||||||| || |||||||| || ||||||||||||||||||||
Sbjct: 2160 agaaaagcgttttggtcagtcaccggtatttattgcagcaaccttcatggaacagggagg 2219
Query: 410 cattccaccatcaaccaattctgcttctcttttgaaagaagccattcatgtaattagttg 469
||||||||||||||||||| |||| |||||| | ||||||||||| ||||| ||||| ||
Sbjct: 2220 cattccaccatcaaccaatcctgcatctcttctaaaagaagccatccatgttattagctg 2279
Query: 470 tggatatgaagacaagacagaatggggcaaagagattggatggatctacggttctgtgac 529
|||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 2280 tggatatgaagacaagactgaatggggcaaagagatcggatggatctatggttctgtgac 2339
Query: 530 agaagatattttaactgggtttaagatgcatgcacgtggttggatatcaatctattgtat 589
||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2340 tgaagatattttgactggctttaagatgcatgcacgtggttggatatcgatctattgtat 2399
Query: 590 gcctccacgcccagcatttaaggggtctgctcctatcaatctttctgatcggttgaacca 649
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 2400 gcctccacgcccagcatttaagggatctgctcctatcaatctttctgatcggttgaatca 2459
Query: 650 ggtgcttcggtgggccttgggatcaattgaaattttgctgagcaggcattgtccaatatg 709
||| ||||| |||||||||||||||||||| ||| |||| ||||||||||| || |||||
Sbjct: 2460 ggttcttcgatgggccttgggatcaattgagattctgctaagcaggcattgccccatatg 2519
Query: 710 gtatggttacaatggaaaattgaagctccttgagaggttggcatacattaataccattgt 769
||||||||||||||| | ||||||||||| |||||| ||||||| ||||| || |||||
Sbjct: 2520 gtatggttacaatgggaggttgaagctcctggagaggctggcatatattaacactattgt 2579
Query: 770 gtacccactgacctctatcccactgatcgcttactg 805
|||||||| ||||||||||||||||| ||||||||
Sbjct: 2580 ctacccactcacctctatcccactgattgcttactg 2615
Score = 93.7 bits (47), Expect = 2e-18
Identities = 82/90 (91%), Gaps = 4/90 (4%)
Strand = Plus / Plus
Query: 20 aaacatgctatgtacaattcccctacaacgttttgatggtcattgatttgctacgatcga 79
||||||||||||| |||||||| ||| ||||||||||| ||||||||||| | ||||||
Sbjct: 1772 aaacatgctatgttcaattccc--acagcgttttgatgg-cattgatttgc-atgatcga 1827
Query: 80 tatgccaatcgtaatattgtgttctttgat 109
||||||||||| ||||||||||||||||||
Sbjct: 1828 tatgccaatcgcaatattgtgttctttgat 1857
>29761.m000416 Cellulose synthase A catalytic subunit 6 [UDP-forming],
putative
Length = 2700
Score = 153 bits (77), Expect = 2e-36
Identities = 206/249 (82%)
Strand = Plus / Plus
Query: 435 tctcttttgaaagaagccattcatgtaattagttgtggatatgaagacaagacagaatgg 494
||||| ||||||||||||||||| || ||||| ||||||||||| || ||||| || |||
Sbjct: 2209 tctctcttgaaagaagccattcacgtcattagctgtggatatgaggataagaccgactgg 2268
Query: 495 ggcaaagagattggatggatctacggttctgtgacagaagatattttaactgggtttaag 554
|| | || || |||||||| || |||||||| |||||||||||| | || || || |||
Sbjct: 2269 ggtagtgaaataggatggatatatggttctgtaacagaagatattcttacaggattcaag 2328
Query: 555 atgcatgcacgtggttggatatcaatctattgtatgcctccacgcccagcatttaagggg 614
||||| || |||||||||| |||||||||||| ||||| | ||| | || ||||| ||
Sbjct: 2329 atgcacgctcgtggttggagatcaatctattgcatgccacaacgtgctgcctttaaagga 2388
Query: 615 tctgctcctatcaatctttctgatcggttgaaccaggtgcttcggtgggccttgggatca 674
|||||||| ||||||||||||||||| | || || |||||||||||||| || || |||
Sbjct: 2389 tctgctcccatcaatctttctgatcgtctaaatcaagtgcttcggtgggctttaggttca 2448
Query: 675 attgaaatt 683
||||||||
Sbjct: 2449 gttgaaatt 2457
>29606.m000101 Cellulose synthase A catalytic subunit 6 [UDP-forming],
putative
Length = 3258
Score = 121 bits (61), Expect = 7e-27
Identities = 163/197 (82%)
Strand = Plus / Plus
Query: 444 aaagaagccattcatgtaattagttgtggatatgaagacaagacagaatggggcaaagag 503
||||| || |||||||| || || ||||| || || ||||| || || ||||| | |||
Sbjct: 2263 aaagaggctattcatgttatcagctgtgggtacgaggacaaaacggactggggaagtgag 2322
Query: 504 attggatggatctacggttctgtgacagaagatattttaactgggtttaagatgcatgca 563
|||||||||||||| |||||||| || ||||||||| | ||||| || |||||||||||
Sbjct: 2323 attggatggatctatggttctgttactgaagatattcttactggattcaagatgcatgct 2382
Query: 564 cgtggttggatatcaatctattgtatgcctccacgcccagcatttaaggggtctgctcct 623
||||||||| ||||| || || |||||| || ||||| ||||| ||||||||||||
Sbjct: 2383 cgtggttggcggtcaatttactgcatgcctaagcgtccagcctttaaagggtctgctcct 2442
Query: 624 atcaatctttctgatcg 640
|||||||||||||||||
Sbjct: 2443 atcaatctttctgatcg 2459
>29637.m000754 Cellulose synthase A catalytic subunit 6 [UDP-forming],
putative
Length = 3135
Score = 89.7 bits (45), Expect = 2e-17
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 447 gaagccattcatgtaattagttgtggatatgaagacaagacagaatggggcaaagagatt 506
||||| || ||||| |||||||||||||||||||| ||||| |||||||| |||||| ||
Sbjct: 2146 gaagctatccatgttattagttgtggatatgaagagaagactgaatggggaaaagaggtt 2205
Query: 507 ggatggatctacggttc 523
||||||||||| |||||
Sbjct: 2206 ggatggatctatggttc 2222
>29863.m001055 Cellulose synthase A catalytic subunit 6 [UDP-forming],
putative
Length = 3288
Score = 73.8 bits (37), Expect = 1e-12
Identities = 109/133 (81%)
Strand = Plus / Plus
Query: 428 ttctgcttctcttttgaaagaagccattcatgtaattagttgtggatatgaagacaagac 487
|||||| || |||||||||||||| |||||||| || || ||||| |||||||| || |
Sbjct: 2280 ttctgcatcacttttgaaagaagcaattcatgtcatcagctgtggctatgaagataaatc 2339
Query: 488 agaatggggcaaagagattggatggatctacggttctgtgacagaagatattttaactgg 547
|||||||| |||||| |||| ||||| || |||||||| || || ||||| || || ||
Sbjct: 2340 cgaatgggggaaagaggttgggtggatttatggttctgtcactgaggatatattgacagg 2399
Query: 548 gtttaagatgcat 560
|| |||||||||
Sbjct: 2400 cttcaagatgcat 2412